PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY60045.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 315aa    MW: 35202 Da    PI: 7.522
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY60045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.43.9e-06326226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                k +lC+ffa  G C  G+ C FaH+
  TEY60045.1  3 KGVLCKFFAH-GACLKGEHCEFAHD 26
                678***6666.*************5 PP
2zf-CCCH26.21.4e-083454526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                +C+f+++ G+C yG+rC++ H+
  TEY60045.1 34 ICSFYQK-GICTYGSRCRYEHV 54
                7******.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSKGVLCKFF AHGACLKGEH CEFAHDWKAP SNNICSFYQK GICTYGSRCR YEHVKVCRSS  60
SDSPLPIALP YGGAVSTAAS TPPPTLGHDD MLSDDNHVIC SFSGAGDCPR GEDCPHIHGD  120
LCPICDKRCL HPFRPQEREE HLKSCEKRRK HMEALRCSQE IECSVCLEAV LSKPTSAERK  180
FGILSECDHS FCISCIRNWR SSSSTSGIHL NSAVRACPLC RRLSYFVIPS VVWYSSSEEK  240
QEIVQSYKTK LRSIDCKHFD FGNGTCPFGT SCFYRHAFHD GRLEEVAVRH VGGDDGDVVV  300
AKDIRIPDFL NLQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-139C3H family protein