PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY60039.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 412aa MW: 45448.7 Da PI: 6.7403

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY60039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.2e-11	305	350	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L++l P+ +k s a++L +Av+YIk+Lq TEY60039.1 305 SIAERVRRTKISEKMKKLQDLFPNM----DKQTSTADMLDLAVKYIKDLQ 350 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MFSSEAISRD MSRNSSSFLN EGNLKSRDSD LFVNQAQMQP QGLARYRSAP SSFLAALLDS 60 TTENSSSGDD ESEALLSALM DAPRDLNQKS GHYHMKQEVG AESEPRPGQM GYESPGIVGS 120 YSVGMENQAN LRMNNGSNLV RQSSSPAGFF NGYSMMGEVE NYRVQNHSKS SSSSSAAGMS 180 SHMSFTSSRF MPSIPENSNE SIATRNPENG HLGSANAREF DALFPQDSWN HDTPFNPLKR 240 TMFSNFNGLE NQNGETRRNP GLVHHMSLPK TASEMAELDK FLQVQPDTIP CQIRAKRGCA 300 THPRSIAERV RRTKISEKMK KLQDLFPNMD KQTSTADMLD LAVKYIKDLQ DPHGDEGKVR 360 LLENSSTNNN SQIVVYKLAT ARLLSRGCHV VCVLVECLSL SMLVANNADV NL

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MFSSEAISRD MSRNSSSFLN EGNLKSRDSD LFVNQAQMQP QGLARYRSAP SSFLAALLDS  60
TTENSSSGDD ESEALLSALM DAPRDLNQKS GHYHMKQEVG AESEPRPGQM GYESPGIVGS  120
YSVGMENQAN LRMNNGSNLV RQSSSPAGFF NGYSMMGEVE NYRVQNHSKS SSSSSAAGMS  180
SHMSFTSSRF MPSIPENSNE SIATRNPENG HLGSANAREF DALFPQDSWN HDTPFNPLKR  240
TMFSNFNGLE NQNGETRRNP GLVHHMSLPK TASEMAELDK FLQVQPDTIP CQIRAKRGCA  300
THPRSIAERV RRTKISEKMK KLQDLFPNMD KQTSTADMLD LAVKYIKDLQ DPHGDEGKVR  360
LLENSSTNNN SQIVVYKLAT ARLLSRGCHV VCVLVECLSL SMLVANNADV NL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	4e-52	bHLH family protein