PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59482.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 535aa MW: 60511.9 Da PI: 9.8321

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.6	3.3e-21	30	125	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+YA e+GFs r+s+skk+k+n+ +++++fvC k g+++e ++k ++r r e rt Ckak+ + k++ w ++ + + HnH l+ TEY59482.1 30 EFYNQYACEAGFSARISNSKKNKMNE-VVWKQFVCFKAGQTDEVRSKnrassgGPIKKRARGEVRTYCKAKISIVKQQtGPYWSISLFTEGHNHGLS 125 6******************98877.99*******9998888677776566788999*******999997889**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MNDELHIPQT ANDRKLEIGM KFASIDDAFE FYNQYACEAG FSARISNSKK NKMNEVVWKQ 60 FVCFKAGQTD EVRSKNRASS GGPIKKRARG EVRTYCKAKI SIVKQQTGPY WSISLFTEGH 120 NHGLSTPSKV HLLRSYRSVS AAKRVLTQQF SEANIPTCQQ MQLMEIEHGG PESVGCTERD 180 IRNVERDMRD EQKGIDAENL VEFFTSEKEK NSSFFFDYET DSDNSIDDIM IYNVVSFQSS 240 SSKPMQLMHD RQRDHMSCSC GKFEFDGIPC RHMLAFFRIS QIFELPKKYI LKRWTQEAKI 300 GVVYALDDEN TNDDPTRLLM TRRSKLSYKA SILIDYASLT DEGTKFLNEQ LDSLHGKIKE 360 MGASSTTVSS SQTRKNLDKP RNIGDPSNIR TKGSGKRMLS SKEKSTLKAR ACHGCGLSGV 420 SHDKRNCPKL HDCFIFQDDI LEKIHKHKIH PTAHPSFLFI KLRNLTDGEK AFTKKSSAAT 480 TRSLSGFPTG LQPIVLIVLP LNSPTVKTKF MSQRSPKSAD LRRSPTPGRA RAPPN

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MNDELHIPQT ANDRKLEIGM KFASIDDAFE FYNQYACEAG FSARISNSKK NKMNEVVWKQ  60
FVCFKAGQTD EVRSKNRASS GGPIKKRARG EVRTYCKAKI SIVKQQTGPY WSISLFTEGH  120
NHGLSTPSKV HLLRSYRSVS AAKRVLTQQF SEANIPTCQQ MQLMEIEHGG PESVGCTERD  180
IRNVERDMRD EQKGIDAENL VEFFTSEKEK NSSFFFDYET DSDNSIDDIM IYNVVSFQSS  240
SSKPMQLMHD RQRDHMSCSC GKFEFDGIPC RHMLAFFRIS QIFELPKKYI LKRWTQEAKI  300
GVVYALDDEN TNDDPTRLLM TRRSKLSYKA SILIDYASLT DEGTKFLNEQ LDSLHGKIKE  360
MGASSTTVSS SQTRKNLDKP RNIGDPSNIR TKGSGKRMLS SKEKSTLKAR ACHGCGLSGV  420
SHDKRNCPKL HDCFIFQDDI LEKIHKHKIH PTAHPSFLFI KLRNLTDGEK AFTKKSSAAT  480
TRSLSGFPTG LQPIVLIVLP LNSPTVKTKF MSQRSPKSAD LRRSPTPGRA RAPPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-24	FAR1 family protein