PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59226.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 327aa MW: 36823.1 Da PI: 8.7482

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.3	2.9e-16	84	133	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa a+++a+ k++g TEY59226.1 84 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAACAYDRAAIKFRG 133 78*****************......55**********************997 PP
2	AP2	44.7	3.4e-14	176	226	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g TEY59226.1 176 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 226 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MEDEGGERKR SSRIFGFSVD HATGGYDPCS PPVTRQFFPV ESGRAGEFPR SHWMGVRFCE 60 SDPPSADVAP PLKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY LGGFDTAHAA 120 ACAYDRAAIK FRGVEADINF SLEDYEEDLK QMSNLTKEEF VHVLRRQSTG FPRGSSKYRG 180 VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE IEAARAYDKA AIKCNGKEAV TNFEPSIYED 240 ELNAAEPSHN KSTSDTSLDL SLGNSASKTD VWRRPDQVQS GKPRQMANNE QQWQMPLFAT 300 AAVSSGFPQA QFNWLHANGI HPLIKPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-114	AP2 family protein