PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY59066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | Trihelix | ||||||||
Protein Properties | Length: 254aa MW: 29079.2 Da PI: 5.7642 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 43 | 1.2e-13 | 33 | 89 | 26 | 81 |
trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 + +++W+ v+ ++r+ g++r+p+qC+++w+nl ++kki++++++ ++e++s + + TEY59066.1 33 QVEAKWDYVACHCRRNGVSRGPIQCQKRWSNLLSDFKKIRTWDSRVpQEEDESFWDM 89 5578****************************************9855556555544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MAAQGHQSPA DSNKTPRHPR WSRQETLVLI EDQVEAKWDY VACHCRRNGV SRGPIQCQKR 60 WSNLLSDFKK IRTWDSRVPQ EEDESFWDMR SDFRRERKLP GFFVREVYEV LDGKDFVGAA 120 YQLALVAVSP HENNVNGDGL DDEDGMVDSE EVEEEVLVTS PGKENVQAND KTYTIPSPVP 180 ISETRYKPSY TNQGTGNKNK DFRREEEFQE GAKKRKRSSS DCVKTDVDGI LIKALERNNE 240 LLSAHSKIRS QVSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 213 | 218 | KKRKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-38 | Trihelix family protein |