PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY59023.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 382aa MW: 41832.1 Da PI: 6.9271

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY59023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	174	1.6e-54	38	142	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw+ q i++ +dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv TEY59023.1 38 QLQMFWNFQqneIQNLNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 136 89**9776779999******************************************************************************* PP NF-YC 97 prdelk 102 prde+k TEY59023.1 137 PRDEIK 142 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MENNPQQSAT PPYPPAVAAP GYPSQPPYQH LLQQQQQQLQ MFWNFQQNEI QNLNDFKNHQ 60 LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI RSWLHAEENK RRTLQKNDIA 120 AAITRTDIFD FLVDIVPRDE IKDEAASLGG IVGPPAGPGG VPVVPYFYPP MGQTMIGRPA 180 VVTGVDPGVY VQPPPPAPSQ AWQSVWQTGA EDGSYGSGGG ASSGQGNLDG VERKTVATVS 240 FVSGIDKVSE LLCVLRVSIA VLHLCCICSY PVKKTLSCGV GQFSGKQVSL GKLLLNLLPF 300 VACVSHVPDM SRHHGSNFFM QNSFFAFYAN SSVSITFLNL YSVIQLHYII NQLFVPGLDI 360 PKDKPGRNQQ AVMAIGDFPY FA

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MENNPQQSAT PPYPPAVAAP GYPSQPPYQH LLQQQQQQLQ MFWNFQQNEI QNLNDFKNHQ  60
LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI RSWLHAEENK RRTLQKNDIA  120
AAITRTDIFD FLVDIVPRDE IKDEAASLGG IVGPPAGPGG VPVVPYFYPP MGQTMIGRPA  180
VVTGVDPGVY VQPPPPAPSQ AWQSVWQTGA EDGSYGSGGG ASSGQGNLDG VERKTVATVS  240
FVSGIDKVSE LLCVLRVSIA VLHLCCICSY PVKKTLSCGV GQFSGKQVSL GKLLLNLLPF  300
VACVSHVPDM SRHHGSNFFM QNSFFAFYAN SSVSITFLNL YSVIQLHYII NQLFVPGLDI  360
PKDKPGRNQQ AVMAIGDFPY FA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	117	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	1e-67	NF-YC family protein