PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY58587.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 214aa MW: 22887 Da PI: 8.5034 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.1 | 0.0006 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H TEY58587.1 80 YQCKTCSKCFPSFQALGGHRASH 102 9***********99999998887 PP | |||||||
2 | zf-C2H2 | 11.2 | 0.0012 | 140 | 162 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY58587.1 140 HECSICGAEFGSGQALGGHMRRH 162 78********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
MQQEVAMVKG KRSKRPRSAS PLALTIASTS STSAVISNAS PSHSSGIALA HDEEEDMANC 60 LILLAEGRLP PQPPASAEVY QCKTCSKCFP SFQALGGHRA SHKKPNKPTS LEEKKPLSDE 120 DTNLSLQISN RPASGTPRVH ECSICGAEFG SGQALGGHMR RHRPIPGVKK ARNLLSLDLN 180 LPAPGDDQPE SKFPFAAKEQ VIVFAASPLI DCHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28200.1 | 2e-47 | C2H2 family protein |