PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY58546.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 396aa MW: 43669.4 Da PI: 9.5887

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY58546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.3e-05	50	72	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H TEY58546.1 50 FICEICNKGFQRDQNLQLHRRGH 72 89*******************88 PP
2	zf-C2H2	13.1	0.00028	127	149	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ TEY58546.1 127 WKCEKCSKKYAVQSDWKAHSKTC 149 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MMSADVFSPQ INPNSKPPSA KKRRNLPGTP DPDAEVIALS PKTLMATNRF ICEICNKGFQ 60 RDQNLQLHRR GHNLPWKLKQ RANKDQIKKK VYICPEKSCV HHEPGRALGD LTGIKKHFSR 120 KHGEKKWKCE KCSKKYAVQS DWKAHSKTCG TREYKCDCGT LFSRKDSFIT HRAFCDALAD 180 ESARVVVTPN NLNDLCGNLM NGGIQNFGNP NQQKPRLSLW LDQANSDHNS NMFMPSSNDI 240 VQMASNNLFA SNPSMLNYSN LSLSPLQGMM KEEAETPTTM PDSLASLYSH SHNSATALLQ 300 KAAQMGSTKS SLAFFGNTAG LMTTSSANRS ELHQVFENPA ANNIMNFSNS LGGAANSVSL 360 HGFTRDFLGM GGDGAGPFLP QELAKFASIT HFTTNH

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MMSADVFSPQ INPNSKPPSA KKRRNLPGTP DPDAEVIALS PKTLMATNRF ICEICNKGFQ  60
RDQNLQLHRR GHNLPWKLKQ RANKDQIKKK VYICPEKSCV HHEPGRALGD LTGIKKHFSR  120
KHGEKKWKCE KCSKKYAVQS DWKAHSKTCG TREYKCDCGT LFSRKDSFIT HRAFCDALAD  180
ESARVVVTPN NLNDLCGNLM NGGIQNFGNP NQQKPRLSLW LDQANSDHNS NMFMPSSNDI  240
VQMASNNLFA SNPSMLNYSN LSLSPLQGMM KEEAETPTTM PDSLASLYSH SHNSATALLQ  300
KAAQMGSTKS SLAFFGNTAG LMTTSSANRS ELHQVFENPA ANNIMNFSNS LGGAANSVSL  360
HGFTRDFLGM GGDGAGPFLP QELAKFASIT HFTTNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-109	C2H2 family protein