PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY56052.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | M-type_MADS | ||||||||
Protein Properties | Length: 99aa MW: 11419.4 Da PI: 10.3797 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.4 | 4.6e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +rie+ks rqvtfskRrng++KKA+ELSvLCd ++a++i+ss gkly y+s TEY56052.1 9 ERIEDKSSRQVTFSKRRNGLFKKAKELSVLCDLDIALVIYSSPGKLYQYCS 59 69***********************************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 99 aa Download sequence |
MGRRKLKMER IEDKSSRQVT FSKRRNGLFK KAKELSVLCD LDIALVIYSS PGKLYQYCST 60 HRLTRIAIEL EKQFKGIINL SWGLEFVKHS SFGEGSFAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10140.2 | 1e-25 | MIKC_MADS family protein |