PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55927.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 427aa MW: 48450.4 Da PI: 7.24

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.1	8.6e-13	30	74	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +W++eEd++l + + ++G+++W Ia+++ +t qc+ rw++yl TEY55927.1 30 SWSQEEDDILREQIYLHGSENWGIIASKFK-DKTTRQCRRRWFTYL 74 6**************************9.***********97 PP
2	Myb_DNA-binding	39.2	1.7e-12	80	123	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W +eEd ll +a + +G++ W+ Ia+ + gRt++ +k+r+ + TEY55927.1 80 KGGWLPEEDMLLCEAQRVYGNR-WTEIAKVVS-GRTDNAVKNRFTT 123 678*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MKNKELNSSS SNLDTEFGEV LKKKERHIVS WSQEEDDILR EQIYLHGSEN WGIIASKFKD 60 KTTRQCRRRW FTYLNSDFKK GGWLPEEDML LCEAQRVYGN RWTEIAKVVS GRTDNAVKNR 120 FTTLCKKRAK REALAKENST TSYVNLNNKR VVFRNGLDSN EGSENALKKR TCISTIAENC 180 KGGENIDHMK EESVVKCVGS EFAQTFLRKD DPKVLALLQQ AELLSSLAIK VKAEKTDQSL 240 ENAWMVLQDF LKQSKESQQL LKITNVDADF HLEKFKALEE GIRSSDEGSR SSRREVEVYE 300 SSPASSEYST GWTVVSIVPR DERGECEEET AALHQEKKDK HCVSVTSTEN EAFEETHVKK 360 GDKDEFSSPT HVTPLFRALA ATIPSPKFSE SEKHFLMKTL GLESSSQSTV ANPSQAPSCK 420 RSLLHCL

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MKNKELNSSS SNLDTEFGEV LKKKERHIVS WSQEEDDILR EQIYLHGSEN WGIIASKFKD  60
KTTRQCRRRW FTYLNSDFKK GGWLPEEDML LCEAQRVYGN RWTEIAKVVS GRTDNAVKNR  120
FTTLCKKRAK REALAKENST TSYVNLNNKR VVFRNGLDSN EGSENALKKR TCISTIAENC  180
KGGENIDHMK EESVVKCVGS EFAQTFLRKD DPKVLALLQQ AELLSSLAIK VKAEKTDQSL  240
ENAWMVLQDF LKQSKESQQL LKITNVDADF HLEKFKALEE GIRSSDEGSR SSRREVEVYE  300
SSPASSEYST GWTVVSIVPR DERGECEEET AALHQEKKDK HCVSVTSTEN EAFEETHVKK  360
GDKDEFSSPT HVTPLFRALA ATIPSPKFSE SEKHFLMKTL GLESSSQSTV ANPSQAPSCK  420
RSLLHCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-122	MYB family protein