PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55772.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 430aa MW: 47622.6 Da PI: 8.9684

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.2	7e-31	220	270	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ TEY55772.1 220 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 270 79***********************************************96 PP
2	K-box	95.5	8.4e-32	297	369	12	84
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 + +++ e++kLk++ie Lqr++Rh++GedL+++s+k+Lq+LeqqL+ +lk+iRs+Kn+ll+++i+elq+k TEY55772.1 297 ESPVNWTLEHSKLKARIELLQRNHRHYMGEDLDTMSVKDLQNLEQQLDGALKTIRSRKNQLLFDSISELQRKV 369 55679******************************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MVIVADPCAV VGAVQQQGQV ALLRGGDLAV VVGRARAAAV ASGRERAVDV WGYGSFGMWG 60 AGASSGFGAA LAAEELIFIE NPALIGSLSG KIGNLIRLRR LVLTESGGSG GVSNWIGEFA 120 YLEQLTLLRN RFSGEIPMDA FRNMKKLKIL YLSENAFQGA MPESIGSATA LVKLDLSHNG 180 FSGKITENLT CLKKALGPKI KREKESLERE RMGRGKVQLK RIENKINRQV TFSKRRAGLL 240 KKAHEISVLC DAEVALIVFS HKGKLFEYST DSCMDRILEK YERYSFAERQ LIANEPESPV 300 NWTLEHSKLK ARIELLQRNH RHYMGEDLDT MSVKDLQNLE QQLDGALKTI RSRKNQLLFD 360 SISELQRKVC PFSDPREGYP RGKQHASKEG DLSLSLLLGG TYDEESEARR NELDLTLDSL 420 YSCHLGCFAA

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MVIVADPCAV VGAVQQQGQV ALLRGGDLAV VVGRARAAAV ASGRERAVDV WGYGSFGMWG  60
AGASSGFGAA LAAEELIFIE NPALIGSLSG KIGNLIRLRR LVLTESGGSG GVSNWIGEFA  120
YLEQLTLLRN RFSGEIPMDA FRNMKKLKIL YLSENAFQGA MPESIGSATA LVKLDLSHNG  180
FSGKITENLT CLKKALGPKI KREKESLERE RMGRGKVQLK RIENKINRQV TFSKRRAGLL  240
KKAHEISVLC DAEVALIVFS HKGKLFEYST DSCMDRILEK YERYSFAERQ LIANEPESPV  300
NWTLEHSKLK ARIELLQRNH RHYMGEDLDT MSVKDLQNLE QQLDGALKTI RSRKNQLLFD  360
SISELQRKVC PFSDPREGYP RGKQHASKEG DLSLSLLLGG TYDEESEARR NELDLTLDSL  420
YSCHLGCFAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	4e-87	MIKC_MADS family protein