PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55173.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 775aa MW: 88843.7 Da PI: 7.0641

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.7	2e-23	65	149	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +++++s++sk++g++++ + Cs+ g+r +++++ ++r+ +t+Cka+++vkk+++gkw v+++++ HnHe++ TEY55173.1 65 FYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSRPQSSTS----MSQRPCAKTDCKASMHVKKRSEGKWFVYNFVEGHNHEIS 149 9*************************************998877....999*******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MEIDLELPSL EIRNNDGGDD EIVVHDEIMG DGVKLNVSSD SRGRVESYMP QNGMEFETKE 60 GAYFFYREYA RSVGFGITIK ASRRSKKSGK FIDIKIACSR FGSRPQSSTS MSQRPCAKTD 120 CKASMHVKKR SEGKWFVYNF VEGHNHEIST SDFYNAIRGR KNKEADAACE RKGLQLVLDE 180 RDVELLMDYF MRMQAEAPGF YYVLDLDAEA RMRNVFWVDQ KGRNDYAFFG DVVFFDAHYI 240 RNKYRIPFVP IVGVNNHFQF ILLGCALIGD ETKSSFTWLM RTWLRSVAAH GPKVVITDND 300 RSFAEAAHDV FPNAFHCFCP WHVFTTVGQN LSGEFDESAL ILMEFKKCMY RSGTSEEFYK 360 RWHKMVKQFD LADDKWVQSL YDDRRKWVPT YMREVFLCGF CTVERSQSVG SFFDKYLQKE 420 TTFHEFIDQY KLFLHEWCEQ EVKAEAETRS SGPILICHSP FEKQMSKIYT NAIFRKFQAE 480 VSGILSCTPE KEGEDGETIL YKVHDLERKQ TFTVSWNRGI YGIHCLCRLF EYSGYLCRHT 540 LSVLQLSGIS TIPSNSVLKR WTRAAKIINI PHQASANTNL RVHRFNDICK LSTRLSEEGS 600 ISEDAYKVSH HALEEAMEHC ARLNYSVKSI METTKTAAHG LLDIGQNNDK SAMASKIKVP 660 KKRKVLAAEP ETWPTGMEES GHDVEQMNQR SHRLHDSYMS QQDLHGMEPG LKIPIVNSYS 720 IAEHGGQGPG HLSSPLPLQD CYYSDQSLMQ GVLGNFSARS SLHAAQQSLH AMVYD

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MEIDLELPSL EIRNNDGGDD EIVVHDEIMG DGVKLNVSSD SRGRVESYMP QNGMEFETKE  60
GAYFFYREYA RSVGFGITIK ASRRSKKSGK FIDIKIACSR FGSRPQSSTS MSQRPCAKTD  120
CKASMHVKKR SEGKWFVYNF VEGHNHEIST SDFYNAIRGR KNKEADAACE RKGLQLVLDE  180
RDVELLMDYF MRMQAEAPGF YYVLDLDAEA RMRNVFWVDQ KGRNDYAFFG DVVFFDAHYI  240
RNKYRIPFVP IVGVNNHFQF ILLGCALIGD ETKSSFTWLM RTWLRSVAAH GPKVVITDND  300
RSFAEAAHDV FPNAFHCFCP WHVFTTVGQN LSGEFDESAL ILMEFKKCMY RSGTSEEFYK  360
RWHKMVKQFD LADDKWVQSL YDDRRKWVPT YMREVFLCGF CTVERSQSVG SFFDKYLQKE  420
TTFHEFIDQY KLFLHEWCEQ EVKAEAETRS SGPILICHSP FEKQMSKIYT NAIFRKFQAE  480
VSGILSCTPE KEGEDGETIL YKVHDLERKQ TFTVSWNRGI YGIHCLCRLF EYSGYLCRHT  540
LSVLQLSGIS TIPSNSVLKR WTRAAKIINI PHQASANTNL RVHRFNDICK LSTRLSEEGS  600
ISEDAYKVSH HALEEAMEHC ARLNYSVKSI METTKTAAHG LLDIGQNNDK SAMASKIKVP  660
KKRKVLAAEP ETWPTGMEES GHDVEQMNQR SHRLHDSYMS QQDLHGMEPG LKIPIVNSYS  720
IAEHGGQGPG HLSSPLPLQD CYYSDQSLMQ GVLGNFSARS SLHAAQQSLH AMVYD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	658	664	KVPKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.3	0.0	FAR1 family protein