PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55108.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 434aa MW: 49278.8 Da PI: 9.3421

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.9e-17	35	78	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT +Ed++lv++vk + ++Wk+I+++++ gRt+ qc +rwqk+l TEY55108.1 35 WTDDEDKQLVEVVKWFKARNWKKISEHLP-GRTDVQCLHRWQKVL 78 ***************************.**********986 PP
2	Myb_DNA-binding	47.8	3.2e-15	84	130	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +WT+ Ed++ ++ v ++G++ W+ Ia+ + gR +kqc++rw+++l TEY55108.1 84 KSPWTKAEDDRVIEFVGRFGNKKWSFIANFVD-GRNGKQCRERWYNHL 130 679***************************.***********97 PP
3	Myb_DNA-binding	44.1	4.9e-14	136	178	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+ E+e l ++++ G++ W+ Ia+ ++ gRt + +k++w+ TEY55108.1 136 KDPWTKAEEETLRYYHQLIGNK-WSEIAKFLP-GRTYNAIKNHWN 178 689*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MLAVHDLISM VSDFVRFGNW LCLILKRGVA LIEGWTDDED KQLVEVVKWF KARNWKKISE 60 HLPGRTDVQC LHRWQKVLHP DLIKSPWTKA EDDRVIEFVG RFGNKKWSFI ANFVDGRNGK 120 QCRERWYNHL DPAINKDPWT KAEEETLRYY HQLIGNKWSE IAKFLPGRTY NAIKNHWNCT 180 VRKRPDLNLP PVAMESGIIL SPDADQKTVV QKPVGSCSTI MAFDNAEAKP ALLDSCRSSE 240 KVSNFNGKAF TSPISRDNSP CVTDDRCDHS PVDTSLSLSV CGYTANSKNT RKRSWMCQSP 300 SDPPQLNGHQ LVDSYPTNLS LSISSNAGSP ESMLKSSAIS YRNTPSFIRR KTYREVASGI 360 GSRSFSHPVW YSSLMSKRRL IPYRDTGSGS SVTVERRLER AFDLEWDSSS VESCHTPGSS 420 QLEDRKKLIS TPSK

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MLAVHDLISM VSDFVRFGNW LCLILKRGVA LIEGWTDDED KQLVEVVKWF KARNWKKISE  60
HLPGRTDVQC LHRWQKVLHP DLIKSPWTKA EDDRVIEFVG RFGNKKWSFI ANFVDGRNGK  120
QCRERWYNHL DPAINKDPWT KAEEETLRYY HQLIGNKWSE IAKFLPGRTY NAIKNHWNCT  180
VRKRPDLNLP PVAMESGIIL SPDADQKTVV QKPVGSCSTI MAFDNAEAKP ALLDSCRSSE  240
KVSNFNGKAF TSPISRDNSP CVTDDRCDHS PVDTSLSLSV CGYTANSKNT RKRSWMCQSP  300
SDPPQLNGHQ LVDSYPTNLS LSISSNAGSP ESMLKSSAIS YRNTPSFIRR KTYREVASGI  360
GSRSFSHPVW YSSLMSKRRL IPYRDTGSGS SVTVERRLER AFDLEWDSSS VESCHTPGSS  420
QLEDRKKLIS TPSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09370.1	2e-64	MYB family protein