PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY54632.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 650aa MW: 75183.1 Da PI: 8.0409

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY54632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.4	2.9e-24	25	113	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk +GF +r+ + +k + +g+ + f+C ++g+r+++++ ++ +r+r+e r+gCka+lk++ +++gk+++ k+++eHnH+l+ TEY54632.1 25 DFYMKYAKATGFGTRRIAAHKDRITGNLLDISFCCCRQGFRATDNRV-VTVKRPRPEIRCGCKAMLKINGRYSGKFRIVKFVEEHNHDLC 113 6****************************************9988.99************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MDYAISQDFI PKIGMEFETE VEAYDFYMKY AKATGFGTRR IAAHKDRITG NLLDISFCCC 60 RQGFRATDNR VVTVKRPRPE IRCGCKAMLK INGRYSGKFR IVKFVEEHNH DLCDPEKSYM 120 FRCFRQMSNV QQTQVDVAQS CGPPKKTRDV MAKESGGIQH LGFTHIDLKN YLRTKRTLEI 180 KQGDSGGVLQ YLQRMISEDP HFYYAIQLDV EDLITNIFWT DGRMIQDFGH FGDVVCFDTT 240 CRKHRDGRPI ALFVGVNHHK QTILFGATLL YDETIETFEW LFSAFEDAMM GKRPKTILTD 300 QDQAMSAALA SKWPSTHHRL CVWHIFQNAA IHLSSLFSSF KNTFAADFSR CVYDLEEESE 360 FLEAWNKMLE KYNLQDNQWL TRMFSLREKW ALVYGRNTFC ADIITTQRGE CMNAVVKHFV 420 NYKNNIVEVF HHFQRLIDDR REKEAAEDLK NAQSSPFMTF PLETLKHAAA VYTHKIFALF 480 SEELRKAFES KIESESELGS SRMYKVRPLD RANAHIVTYD SIEGSISCSC RKFEFSGILC 540 SHSLRVFTLM NVIHIPDEYI LKRWTKHAKS GMTRVCKEGV VGVDEKTRKK QRYKELCNSF 600 IQLTVKAAES EDSYAYAMEC LLKMGNDIDG MVEKGKNVTV EAKKVGDVRD

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MDYAISQDFI PKIGMEFETE VEAYDFYMKY AKATGFGTRR IAAHKDRITG NLLDISFCCC  60
RQGFRATDNR VVTVKRPRPE IRCGCKAMLK INGRYSGKFR IVKFVEEHNH DLCDPEKSYM  120
FRCFRQMSNV QQTQVDVAQS CGPPKKTRDV MAKESGGIQH LGFTHIDLKN YLRTKRTLEI  180
KQGDSGGVLQ YLQRMISEDP HFYYAIQLDV EDLITNIFWT DGRMIQDFGH FGDVVCFDTT  240
CRKHRDGRPI ALFVGVNHHK QTILFGATLL YDETIETFEW LFSAFEDAMM GKRPKTILTD  300
QDQAMSAALA SKWPSTHHRL CVWHIFQNAA IHLSSLFSSF KNTFAADFSR CVYDLEEESE  360
FLEAWNKMLE KYNLQDNQWL TRMFSLREKW ALVYGRNTFC ADIITTQRGE CMNAVVKHFV  420
NYKNNIVEVF HHFQRLIDDR REKEAAEDLK NAQSSPFMTF PLETLKHAAA VYTHKIFALF  480
SEELRKAFES KIESESELGS SRMYKVRPLD RANAHIVTYD SIEGSISCSC RKFEFSGILC  540
SHSLRVFTLM NVIHIPDEYI LKRWTKHAKS GMTRVCKEGV VGVDEKTRKK QRYKELCNSF  600
IQLTVKAAES EDSYAYAMEC LLKMGNDIDG MVEKGKNVTV EAKKVGDVRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	79	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-135	FAR1 family protein