PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY54571.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 655aa MW: 73073.6 Da PI: 6.5103

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY54571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.2	4.2e-20	132	243	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE.............EEETTEEEE-TTHHHHHHHHT--TT-EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliy...........rkksgryvltkGWkeFvkangLkegDfvv 81 f+kvlt sd++++g +++ +k+a+e+ + ++ +++l+ +d++g +W +k+i+ + +++r++lt+GW+ Fv +++L +gD++v TEY54571.1 132 FCKVLTASDTSTHGGFSVLRKHANEClppldmtQ--QTPTQELIAKDLHGIEWHFKHIFrgdlllfwvvdTSQPRRHLLTTGWSTFVTSKRLVAGDSFV 228 99**************************9643..445569************9*****99999999******************* PP EEE-SSSEE..EEEEE- CS B3 82 Fkldgrsefelvvkvfr 98 F + +++el+v+v+ TEY54571.1 229 FL--RGKNGELRVGVRH 243 ..4499999***986 PP
2	Auxin_resp	95.7	7.2e-32	269	348	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t++ F v+Y+Pr+ s+F++ ++k ++a ++++ vGmRfkm+fe+eds+err+sGt+vgv+ +++ +W++SkWrsLk TEY54571.1 269 ASHALLTQTLFVVYYKPRT--SQFIIGLNKCLEAENHRFGVGMRFKMRFEGEDSPERRFSGTIVGVESISS-HWEDSKWRSLK 348 689999**********6..9******************************************776.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MANRVPLSQQ QYGCFPAEGG GGAKDVMYEE LWRACAGPLV DVPQVGEKVY YFPQGHMEQL 60 EASTNQELNQ RIPLFNLPSK ILCSVFNINL LTEVDTDEVY AQITLMPEAD QTQPRSPDIS 120 CDEPPRPVVH SFCKVLTASD TSTHGGFSVL RKHANECLPP LDMTQQTPTQ ELIAKDLHGI 180 EWHFKHIFRG DLLLFWVVDT SQPRRHLLTT GWSTFVTSKR LVAGDSFVFL RGKNGELRVG 240 VRHHARQQNS IPSSVISSQS MHLGVLATAS HALLTQTLFV VYYKPRTSQF IIGLNKCLEA 300 ENHRFGVGMR FKMRFEGEDS PERRFSGTIV GVESISSHWE DSKWRSLKVG ICAEVQWDEP 360 ASIRRPERVS PWEIEPFVAS VPTSLSPPLM SKHKRARPRV EIPVSDNQTS AVSAAWNLPQ 420 ESHQTNHGLE GHKGNHTARS VAETGTGAPP NTMTEEAEES KTASAWSIIS NTSALSSVKQ 480 ISSPVSCQTE RKPDTAATCR LFGIDLNNPS TLPHAENSSM VLDDAPQEGE GFVTKQSRAP 540 RKDTQSRHGQ SSRSRTKVQM QGIAVGRAVD LTTLKGYDEL ITELEVMFEI KGELQPRDKW 600 EIVFTDNEGD MMLMGDDPWL EFVNMVRRIF ICSSQEVKKM KGCEGTNLIT QHLGD

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MANRVPLSQQ QYGCFPAEGG GGAKDVMYEE LWRACAGPLV DVPQVGEKVY YFPQGHMEQL  60
EASTNQELNQ RIPLFNLPSK ILCSVFNINL LTEVDTDEVY AQITLMPEAD QTQPRSPDIS  120
CDEPPRPVVH SFCKVLTASD TSTHGGFSVL RKHANECLPP LDMTQQTPTQ ELIAKDLHGI  180
EWHFKHIFRG DLLLFWVVDT SQPRRHLLTT GWSTFVTSKR LVAGDSFVFL RGKNGELRVG  240
VRHHARQQNS IPSSVISSQS MHLGVLATAS HALLTQTLFV VYYKPRTSQF IIGLNKCLEA  300
ENHRFGVGMR FKMRFEGEDS PERRFSGTIV GVESISSHWE DSKWRSLKVG ICAEVQWDEP  360
ASIRRPERVS PWEIEPFVAS VPTSLSPPLM SKHKRARPRV EIPVSDNQTS AVSAAWNLPQ  420
ESHQTNHGLE GHKGNHTARS VAETGTGAPP NTMTEEAEES KTASAWSIIS NTSALSSVKQ  480
ISSPVSCQTE RKPDTAATCR LFGIDLNNPS TLPHAENSSM VLDDAPQEGE GFVTKQSRAP  540
RKDTQSRHGQ SSRSRTKVQM QGIAVGRAVD LTTLKGYDEL ITELEVMFEI KGELQPRDKW  600
EIVFTDNEGD MMLMGDDPWL EFVNMVRRIF ICSSQEVKKM KGCEGTNLIT QHLGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein