PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY54351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 222aa MW: 26310.6 Da PI: 6.309 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.5 | 3.2e-20 | 58 | 110 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eq++ Lee+F +++++ e++e+LA++lgL rqV vWFqNrRa++k TEY54351.1 58 KRKLSEEQVKMLEECFGSEQKLESERKERLAAELGLYPRQVAVWFQNRRARWK 110 45899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 111.1 | 7.3e-36 | 57 | 141 | 2 | 86 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 +kr+ls+eqvk+LEe+F +e+kLe+erK++la eLgl prqvavWFqnrRAR+k+ +l ++y++Lk+ +d+ + +++rLe+ev+e TEY54351.1 57 RKRKLSEEQVKMLEECFGSEQKLESERKERLAAELGLYPRQVAVWFQNRRARWKSNKLQEEYSKLKSDHDNAVLHKCRLETEVRE 141 8********************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MNTEVDEQMA LISQYYPDAI YTQFVPEHGA ASKPKTRRRR RKNKRCEGGR EGDGVMRKRK 60 LSEEQVKMLE ECFGSEQKLE SERKERLAAE LGLYPRQVAV WFQNRRARWK SNKLQEEYSK 120 LKSDHDNAVL HKCRLETEVR EYPMSFYYYC DRNELLKLKE QLQEAEKEIQ RLSDGFSSNS 180 PCSSFSMEAP PFLGEFGMEG LENVFYNSDQ NNGMEWDNLY YM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 37 | 45 | RRRRRKNKR |
2 | 37 | 60 | RRRRRKNKRCEGGREGDGVMRKRK |
3 | 38 | 61 | RRRRRKNKRCEGGREGDGVMRKRK |
4 | 39 | 62 | RRRRRKNKRCEGGREGDGVMRKRK |
5 | 40 | 63 | RRRRRKNKRCEGGREGDGVMRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-48 | HD-ZIP family protein |