PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY53923.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 301aa MW: 34513.7 Da PI: 9.032

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY53923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.1	2.2e-13	20	79	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ + Aa+ ++ a++k++g TEY53923.1 20 SIYRGVTRHRWTGRYEAHLWDkNCWNEaqnKKgRQVYLGAYDDEGAAARSYDLAALKYWG 79 57*****************999966655446******669**********98 PP
2	AP2	52.6	1.1e-16	122	173	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g TEY53923.1 122 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAIAYDMAAIEYRG 173 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MKPKRTRKTI PRDSPPQRSS IYRGVTRHRW TGRYEAHLWD KNCWNEAQNK KGRQVYLGAY 60 DDEGAAARSY DLAALKYWGR DTILNFPVST YEKEIIEMER QSREEYIGSL RRKSSGFSRG 120 VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTYATQEEA AIAYDMAAIE YRGLNAVTNF 180 DLSRYIKWLK PNAAAASAST NPNNTGSSHI TPLHQPLPPP ISEARPATAT SALGLLLQSS 240 KFKELMEMNM AAEYPSTQLP PPPVVEDHEQ HQTLFESNDY CTYNEDIYVD FSSMMHHLEE 300 L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-103	AP2 family protein