PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY53870.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 429aa MW: 47096.9 Da PI: 9.6279

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY53870.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5e-06	42	64	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H TEY53870.1 42 YVCEICNQGFQRDQNLQMHRRRH 64 9*********************9 PP
2	zf-C2H2	16	3.4e-05	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k H++t+ TEY53870.1 119 WVCDKCNKGYAVQSDYKAHLKTC 141 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MLNSPPEHPT TSRRKRRPAG TPDPDAEVVS LSPKTLLESD RYVCEICNQG FQRDQNLQMH 60 RRRHKVPWKL LKRETPVARK RVFVCPEPTC LHHDPCHALG DLVGIKKHFR RKHSNQKQWV 120 CDKCNKGYAV QSDYKAHLKT CGTRGHSCDC GRVFSRVESF IEHQDACSMG RLRSDCHPLQ 180 AAAATATATA TAACLSRTAS SPSSDTNLST APWAGGHSSL VAPTDSIFMA NAGAATRHRS 240 RPPNLELQLL TKASSSLGFS GNSTKLDSTQ LQLSIGSSEI GDKAENVAAG SRYSPMGSSS 300 TSEKRSSVAA ATVREEAEEQ LRAAMAERAY AEEARQQAKR QRELAEQEFA NAKRIRQQAV 360 AELEKAQALK EQAAQQLSAT ILQITCHSCK HRFHPEAAAF AAETSSSAAN SIRRGYISAA 420 LRDWEVKKN

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MLNSPPEHPT TSRRKRRPAG TPDPDAEVVS LSPKTLLESD RYVCEICNQG FQRDQNLQMH  60
RRRHKVPWKL LKRETPVARK RVFVCPEPTC LHHDPCHALG DLVGIKKHFR RKHSNQKQWV  120
CDKCNKGYAV QSDYKAHLKT CGTRGHSCDC GRVFSRVESF IEHQDACSMG RLRSDCHPLQ  180
AAAATATATA TAACLSRTAS SPSSDTNLST APWAGGHSSL VAPTDSIFMA NAGAATRHRS  240
RPPNLELQLL TKASSSLGFS GNSTKLDSTQ LQLSIGSSEI GDKAENVAAG SRYSPMGSSS  300
TSEKRSSVAA ATVREEAEEQ LRAAMAERAY AEEARQQAKR QRELAEQEFA NAKRIRQQAV  360
AELEKAQALK EQAAQQLSAT ILQITCHSCK HRFHPEAAAF AAETSSSAAN SIRRGYISAA  420
LRDWEVKKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-114	C2H2 family protein