PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY53602.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 234aa MW: 25518.5 Da PI: 8.4994 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 171 | 193 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY53602.1 171 HECSYCGAEFASGQALGGHMRKH 193 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MSDCIDFSNE KNATLLEKQL DWNSDLEIDR DGGGCGGGGD AVFEHRRHRE RQRTKRQRPN 60 SPFSFTITPP PRAASEESTT TEEADTARCL ILLSQGHFIP ITKTRRDAAM YTCKTCNRSF 120 QSFQALGGHP RQPQEAKNEK RYAIFSPTSL SLQLSSVSTT ATAAMKSPRV HECSYCGAEF 180 ASGQALGGHM RKHRGGAAPP IPTNIREAIV FDEAEERMKG GKLAVVGSQS SGAG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 51 | 56 | RQRTKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 7e-21 | C2H2 family protein |