PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY52824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 149aa MW: 16101.1 Da PI: 7.8439 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135.3 | 2.3e-42 | 14 | 112 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C ++C++apyfp e+p kf nvhk+FGasnv+kll+++p ++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l+ el+++++ TEY52824.1 14 PCAACKFLRRRCLSGCIFAPYFPPEEPTKFVNVHKIFGASNVSKLLNEIPAHQREDAVNSLTYEAEARLKDPVYGCVGAITILQRQVFTLQRELDATNA 112 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MAASSSSSSF SKPPCAACKF LRRRCLSGCI FAPYFPPEEP TKFVNVHKIF GASNVSKLLN 60 EIPAHQREDA VNSLTYEAEA RLKDPVYGCV GAITILQRQV FTLQRELDAT NADIMRFASG 120 TGAPRGSGSG YDDPNSTDYW TGKGQDGGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27650.1 | 4e-65 | LBD family protein |