PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY52784.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 258aa MW: 29422.8 Da PI: 7.3097 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.2 | 7.7e-27 | 17 | 67 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRr g+lKKA+EL vLCda+vaviifs tgklye++s TEY52784.1 17 KKIENVNSRQVTFSKRRGGLLKKANELAVLCDAQVAVIIFSGTGKLYEFAS 67 68***********************************************86 PP | |||||||
2 | K-box | 59.9 | 1.1e-20 | 101 | 186 | 15 | 100 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 e+ + e++ L+ eie+L +R+++G++L++L+++eL++Le+qL ++l +i+++K++l+leq+e++ ++ek++ +n+aL +k+ee TEY52784.1 101 EQPTVEIEALRHEIEELHLMNRRMMGKELDELTYNELHKLEHQLAEGLLSIKDRKEKLILEQMERSNQQEKKIALQNEALLEKIEE 186 566789************999**************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MHCIKESKMG RGKIEIKKIE NVNSRQVTFS KRRGGLLKKA NELAVLCDAQ VAVIIFSGTG 60 KLYEFASSCM EQIVARYHQT RGRLQLAAAD VQPDNQVILH EQPTVEIEAL RHEIEELHLM 120 NRRMMGKELD ELTYNELHKL EHQLAEGLLS IKDRKEKLIL EQMERSNQQE KKIALQNEAL 180 LEKIEELRQQ ARVSSNIENH LSLSKDCCLS SSSMHEWRSK EVASDTSLRL GISPISAIAS 240 EATKMPKLEK SNDVMHLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 5e-52 | MIKC_MADS family protein |