PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY52685.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 410aa MW: 44739.8 Da PI: 4.9495

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY52685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.8	1.8e-07	5	44	6	39
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ ++e+++ fC+++ lC +C + H+ H++ TEY52685.1 5 CDFCGEQRAAVFCRSDAASLCLSCDYSVHSAnalsrrHSR 44 *****************************65677777765 PP
2	zf-B_box	23.3	1.3e-07	46	90	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C++++++++ C + ++ lC++C +H + H+++p+ TEY52685.1 46 LVCERCNSQPAFVRCVEEKVSLCQNCDWMGHVNsnaspgHKRQPV 90 68*****************************77789999998875 PP
3	CCT	62	1.9e-21	353	396	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+k+R FeKk+rYesRKa+A+ R RvKGrFvk+ TEY52685.1 353 RTNAVMRYKEKKKSRMFEKKVRYESRKARADVRRRVKGRFVKAG 396 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MGYLCDFCGE QRAAVFCRSD AASLCLSCDY SVHSANALSR RHSRTLVCER CNSQPAFVRC 60 VEEKVSLCQN CDWMGHVNSN ASPGHKRQPV NCYSGCPLAS ELSAVWPFFN SPSVGDSACE 120 REMGSMNITD NRTIDCQDPQ EKANVQNESL WGEACSQPNL DLDKSAGRME SLTHLVDQRL 180 QNVNQATAST SSSMPKVPLP GAKGCALYAD DGCYDDLNMD EIDMGFENYD ELFGMSLDNP 240 KNIFGNDGIF GMQYMSTSNC EGASAAEVSS TGGLNPMQPA CSDVAPADSV ISSKTEPNLC 300 FTKQTQSGLS FSGLTGETTG GDYQDCGVSS MAIVGDPPWY PPGPDSSTPS TSRTNAVMRY 360 KEKKKSRMFE KKVRYESRKA RADVRRRVKG RFVKAGETYD YDPLSPSKSY

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MGYLCDFCGE QRAAVFCRSD AASLCLSCDY SVHSANALSR RHSRTLVCER CNSQPAFVRC  60
VEEKVSLCQN CDWMGHVNSN ASPGHKRQPV NCYSGCPLAS ELSAVWPFFN SPSVGDSACE  120
REMGSMNITD NRTIDCQDPQ EKANVQNESL WGEACSQPNL DLDKSAGRME SLTHLVDQRL  180
QNVNQATAST SSSMPKVPLP GAKGCALYAD DGCYDDLNMD EIDMGFENYD ELFGMSLDNP  240
KNIFGNDGIF GMQYMSTSNC EGASAAEVSS TGGLNPMQPA CSDVAPADSV ISSKTEPNLC  300
FTKQTQSGLS FSGLTGETTG GDYQDCGVSS MAIVGDPPWY PPGPDSSTPS TSRTNAVMRY  360
KEKKKSRMFE KKVRYESRKA RADVRRRVKG RFVKAGETYD YDPLSPSKSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-105	CO-like family protein