PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY51093.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 374aa MW: 41388 Da PI: 9.6218

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY51093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.7	9.9e-06	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY51093.1 74 FVCEICNKGFQRDQNLQLHRRGH 96 89*******************88 PP
2	zf-C2H2	12	0.00063	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TEY51093.1 150 WKCDKCSKIYAVQSDWKAHSKTC 172 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MFPMVIPNSS EEGTNSSRIH QSDLGTLNSM LQNSNAIATP QLKIKKKRNL PGNPDPDAEV 60 IALSPKTLMT ANRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKQRSSKEN RKRAYVCPEP 120 SCLHHHPSRA LGDLTGIKKH YCRKHGEKKW KCDKCSKIYA VQSDWKAHSK TCGTREYRCD 180 CGTLFSRKDS FITHRAFCDA LAEESARLSA ATNSILPQQN PNFSTTTQSY LFSPQNLLPF 240 RNPWGGPLPQ NPNPINLSSP LYQENRSLII SSSPFGNFQA GAAPLSATAL LQKAATMGAT 300 GNVGSTMAHL DMHKTGDGLT RDFLGLTGDQ CSGGGMRELQ LPLMKVSGFE RDHNSLLKNH 360 GFGFTETCSG WGNC

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MFPMVIPNSS EEGTNSSRIH QSDLGTLNSM LQNSNAIATP QLKIKKKRNL PGNPDPDAEV  60
IALSPKTLMT ANRFVCEICN KGFQRDQNLQ LHRRGHNLPW KLKQRSSKEN RKRAYVCPEP  120
SCLHHHPSRA LGDLTGIKKH YCRKHGEKKW KCDKCSKIYA VQSDWKAHSK TCGTREYRCD  180
CGTLFSRKDS FITHRAFCDA LAEESARLSA ATNSILPQQN PNFSTTTQSY LFSPQNLLPF  240
RNPWGGPLPQ NPNPINLSSP LYQENRSLII SSSPFGNFQA GAAPLSATAL LQKAATMGAT  300
GNVGSTMAHL DMHKTGDGLT RDFLGLTGDQ CSGGGMRELQ LPLMKVSGFE RDHNSLLKNH  360
GFGFTETCSG WGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-110	C2H2 family protein