PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY50243.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Trihelix
Protein Properties Length: 340aa    MW: 38999.7 Da    PI: 5.8709
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY50243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix90.91.3e-2871156187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW++qe+l+L+e+r++++ +++++++k plW+evs+ m +e g++rs k+C+ek+enl k+ykk+k+g+ +r  ++ +++++f+qlea
  TEY50243.1  71 RWPRQETLTLLEIRSRLDPKFKEANQKIPLWDEVSRIMsQEYGYQRSGKKCREKFENLYKYYKKTKDGKAGR--QDGKHYRFFRQLEA 156
                 8*************************************8899****************************98..55667*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEDQYEMGDL RQYIDGAGRP LFPAISQPPD LLSCHRPSSY PYDMLIFRPP PDAGAAAPSA  60
AAAGFDSGAG RWPRQETLTL LEIRSRLDPK FKEANQKIPL WDEVSRIMSQ EYGYQRSGKK  120
CREKFENLYK YYKKTKDGKA GRQDGKHYRF FRQLEALYGD ANSSSTNYPY NNQEPYYPLS  180
KDSCDCDTTS SHCTDSNAAE AALEEEDAMM GKRRGKMRRL KASIEEKMRA IAEKQDAWME  240
KMTRAIEGKE EERMMREDQW RRQDAARIDG EHKMWEAEKA WIEARDAALM EAFNGLFERG  300
LEPPWPQPPP PPPPFQLNGG GSAANDGLFR YLIGDSYQRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.18e-58Trihelix family protein