PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY50203.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB_related

Protein Properties

Length: 646aa MW: 71945.5 Da PI: 8.1226

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY50203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.2e-09	525	572	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +l+++v q+G g+W++I + + +Rt ++k++w+++l TEY50203.1 525 WTISEVRKLIEGVSQYGVGRWSRIKKLFFaasAHRTSVDLKDKWRNLL 572 9*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MLIREYYLFS HYRWYYQAME NGDPSLGLED GTIDVEDLLV EPPQDGHLSM DNVICFDEKI 60 AKNAMAIVPV SCSSVKSELD LLSGSDTGIA REGEDILNGE IHVLNAMPIE AEDGYFRLEN 120 DFCNMGDEYL LGVEFAESIT NLDYGSSEGL QAFASDCQIQ VSTDGSDTGC RSDLYRTGDL 180 RKCQTTQKAE SSKFGCTLIR RGCETLDEGN PTVSPRSCSL QNSGKSRNSS SSSFLEVLSD 240 ENDGTFSLAD KMFYSSKTIR NDEIELTGQN DATNAIEGQQ IVATSSVQES SSNVLAQKRS 300 RKPTQRYIDG LADPIPTYSK RKREASSSTI KDKSLGGKER RKCHVGPKPI KVPPEDPEEF 360 SVIAIQVPFG SLANQERSES QSFDTVQHVD CRNSVTKSKG KYATPNNKSD NCVPALEYKK 420 RGDCAEAPSR KRGDCGMGQK KTDAFVTESP SKKKNARAAA TNQKKRNDLA LAVIRKKRDD 480 CFTTESPKKR DDRRLAVVHH KKRDETLTDE SSEEASGRRK HHRLWTISEV RKLIEGVSQY 540 GVGRWSRIKK LFFAASAHRT SVDLKDKWRN LLKASGMQEQ GSQQGEKKRN VAWRPLPKPI 600 LRRVCELATM HPYPKGERGA TKAAARDSTD ITLSDYRRIL SSVNGN

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MLIREYYLFS HYRWYYQAME NGDPSLGLED GTIDVEDLLV EPPQDGHLSM DNVICFDEKI  60
AKNAMAIVPV SCSSVKSELD LLSGSDTGIA REGEDILNGE IHVLNAMPIE AEDGYFRLEN  120
DFCNMGDEYL LGVEFAESIT NLDYGSSEGL QAFASDCQIQ VSTDGSDTGC RSDLYRTGDL  180
RKCQTTQKAE SSKFGCTLIR RGCETLDEGN PTVSPRSCSL QNSGKSRNSS SSSFLEVLSD  240
ENDGTFSLAD KMFYSSKTIR NDEIELTGQN DATNAIEGQQ IVATSSVQES SSNVLAQKRS  300
RKPTQRYIDG LADPIPTYSK RKREASSSTI KDKSLGGKER RKCHVGPKPI KVPPEDPEEF  360
SVIAIQVPFG SLANQERSES QSFDTVQHVD CRNSVTKSKG KYATPNNKSD NCVPALEYKK  420
RGDCAEAPSR KRGDCGMGQK KTDAFVTESP SKKKNARAAA TNQKKRNDLA LAVIRKKRDD  480
CFTTESPKKR DDRRLAVVHH KKRDETLTDE SSEEASGRRK HHRLWTISEV RKLIEGVSQY  540
GVGRWSRIKK LFFAASAHRT SVDLKDKWRN LLKASGMQEQ GSQQGEKKRN VAWRPLPKPI  600
LRRVCELATM HPYPKGERGA TKAAARDSTD ITLSDYRRIL SSVNGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	464	478	KKRNDLALAVIRKKR
2	517	524	GRRKHHRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-24	MYB_related family protein