PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY50185.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 468aa MW: 52234 Da PI: 6.8219

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY50185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.3	3.3e-17	137	186	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TEY50185.1 137 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 186 78*****************......55**********************998 PP
2	AP2	30.8	7.5e-10	229	298	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse...ng.............krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + + ++++++lg f+++ +Aa+a+++a+ k +g TEY50185.1 229 SKYRGVTLHK-CGRWEARMGQFLGkksDAskttrisnneqcfVCRYIYLGLFDSEIDAARAYDKAAIKCNG 298 89******.7**98843335511456666666966666******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MFNLNLAIDP PSPTADRAET ASDMHFVQSG DHVEYSGSSS SSVVNVETSS TAGDENSLSV 60 GFDIWKSSGE CEESEKSSCG YVTKEFFPVK FGEGRMQCLD LPEKSCELTE QRILAQEQQQ 120 KRQLVKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA HAAARAYDRA 180 AIKFRGLDAD INFNVSDYDE DLKQMRNLTK EEFVHILRRQ STGFARGSSK YRGVTLHKCG 240 RWEARMGQFL GKKSDASKTT RISNNEQCFV CRYIYLGLFD SEIDAARAYD KAAIKCNGRE 300 AVTNFDPSTY EEELSSEAPV GGDMHNLDLN LGIAPPPERA HWDIHHMQTE NFQINYGSNN 360 LPENGLKGSA SASVAAQLPQ EYGNVCQYPL MWRGADSCFR PVYTGTTIGK LVEVDPSANW 420 TKDHHPSPLF STAASSGFAT SSAAIHHHQL PTPPPVTTLN NGSHLYWR

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MFNLNLAIDP PSPTADRAET ASDMHFVQSG DHVEYSGSSS SSVVNVETSS TAGDENSLSV  60
GFDIWKSSGE CEESEKSSCG YVTKEFFPVK FGEGRMQCLD LPEKSCELTE QRILAQEQQQ  120
KRQLVKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA HAAARAYDRA  180
AIKFRGLDAD INFNVSDYDE DLKQMRNLTK EEFVHILRRQ STGFARGSSK YRGVTLHKCG  240
RWEARMGQFL GKKSDASKTT RISNNEQCFV CRYIYLGLFD SEIDAARAYD KAAIKCNGRE  300
AVTNFDPSTY EEELSSEAPV GGDMHNLDLN LGIAPPPERA HWDIHHMQTE NFQINYGSNN  360
LPENGLKGSA SASVAAQLPQ EYGNVCQYPL MWRGADSCFR PVYTGTTIGK LVEVDPSANW  420
TKDHHPSPLF STAASSGFAT SSAAIHHHQL PTPPPVTTLN NGSHLYWR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	9e-95	AP2 family protein