PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY50152.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 399aa MW: 46003.1 Da PI: 5.6725

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY50152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.6e-19	16	68	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++f+++q+++Le++F++++++ ++++e A++lgL+ rqV +WFqN+Ra++k TEY50152.1 16 KRRFSDDQIRRLEAMFASESKLEPRRKAEVARELGLQPRQVAIWFQNKRARWK 68 468*************************************************9 PP
2	HD-ZIP_I/II	112.3	3.3e-36	15	99	2	86
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 krr+s++q++ LE +F +e+kLep+rK+e+areLglqprqva+WFqn+RAR+k+k++Ek+y+aL ++ydal+++ e+L++e+++ TEY50152.1 15 DKRRFSDDQIRRLEAMFASESKLEPRRKAEVARELGLQPRQVAIWFQNKRARWKSKHVEKEYAALAASYDALSDRFESLKREKQS 99 59********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MADSITRKKS KSGNDKRRFS DDQIRRLEAM FASESKLEPR RKAEVARELG LQPRQVAIWF 60 QNKRARWKSK HVEKEYAALA ASYDALSDRF ESLKREKQSD KRLVAWDCRM QTTLSKTEFK 120 DEYIKERTLH GYETEVEFGV LTSFAYPLEG DLGEIVVATT RVETMLGDTA VAMHPDDPRC 180 MHLHGKFTVH PFNGRKLNII CDSFFVDMKF GTGAVKITPA HDPDDYEVGK CHDLDCITIF 240 TDDGKINSNG GEEFEGMAHG LHRGDKDNEM CLKICSTSNE VVEYLVKPQW FVSCKGMAED 300 GLNAVIGCTN PKLGILPKQY VAEWQRWLEN IRDWCISRQI WWGHPFMPFM TEDLWQRLPS 360 KMDSVRKESI VISEYPSLVK SWTNDDVESE MDGYDEFCD

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MADSITRKKS KSGNDKRRFS DDQIRRLEAM FASESKLEPR RKAEVARELG LQPRQVAIWF  60
QNKRARWKSK HVEKEYAALA ASYDALSDRF ESLKREKQSD KRLVAWDCRM QTTLSKTEFK  120
DEYIKERTLH GYETEVEFGV LTSFAYPLEG DLGEIVVATT RVETMLGDTA VAMHPDDPRC  180
MHLHGKFTVH PFNGRKLNII CDSFFVDMKF GTGAVKITPA HDPDDYEVGK CHDLDCITIF  240
TDDGKINSNG GEEFEGMAHG LHRGDKDNEM CLKICSTSNE VVEYLVKPQW FVSCKGMAED  300
GLNAVIGCTN PKLGILPKQY VAEWQRWLEN IRDWCISRQI WWGHPFMPFM TEDLWQRLPS  360
KMDSVRKESI VISEYPSLVK SWTNDDVESE MDGYDEFCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	9e-31	HD-ZIP family protein