PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY49579.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 193aa MW: 21668.9 Da PI: 8.34

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY49579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F++ L H +H TEY49579.1 90 FRCMICNKGFPSYQALGGHRASH 112 89***********9999998887 PP
2	zf-C2H2	13.5	0.00022	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H TEY49579.1 132 HECPICLKVFPSGQALGGHKRSH 154 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MFPCGRSLGG HMKSHLINIS STPKKPRKRF SDDDDDDDDR EEVALSLILL SMDCISFEES 60 ESRRKKKSKA SRNLDLELVN SLSQSDCSKF RCMICNKGFP SYQALGGHRA SHKKFKGCCA 120 PTIPTEIPKP DHECPICLKV FPSGQALGGH KRSHLITDHQ PKTILDLNLP APVEDELKPW 180 WIRATREPLL STS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	3e-25	C2H2 family protein