PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY49097.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 179aa MW: 19746.5 Da PI: 10.1936 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.7 | 7.2e-29 | 99 | 149 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +rie+ks rqvtfskRrng++KKA+ELSvLCd ++a+ii+ss gkly y+s TEY49097.1 99 ERIEDKSSRQVTFSKRRNGLFKKAKELSVLCDLDIALIIYSSPGKLYQYCS 149 69***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MSFYRTPKAP AAATVKPRPA AAVLVKTTSL RCDVGKSGDG YVHGPDGGGG DQCVDRKASS 60 YISQPVNVVS SKSPTSEIRI YFIFSPNLRK WGGGKLKIER IEDKSSRQVT FSKRRNGLFK 120 KAKELSVLCD LDIALIIYSS PGKLYQYCST HRTSGSENFH GKGVRQRCPE EDLRLDSDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03710.3 | 4e-23 | MIKC_MADS family protein |