PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY48512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27500.4 Da PI: 9.9394 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.1 | 7.6e-31 | 18 | 68 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+ TEY48512.1 18 KRIESTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 68 79***********************************************95 PP | |||||||
2 | K-box | 100.6 | 2.1e-33 | 92 | 186 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++++++a + +qqe++kL+++i+ Lq ++R+++Ge+++sL lk+L+++e ++e+++++iR+kKnell+++ie +q++e el+++n+ Lr+k++e TEY48512.1 92 SEANTQAMVQFYQQEANKLRRQIRDLQASNRQMMGEGVTSLPLKDLKSMEGKVERAISRIRAKKNELLFAEIELMQRREIELHNANMFLRSKIAE 186 334788889***********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MALCNQERKN GRGKIEIKRI ESTTNRQVTF CKRRNGLLKK AYELSVLCDA EVALVVFSSR 60 GRLYEYSNNS VRSTIDRYKK ATADSTSAVS TSEANTQAMV QFYQQEANKL RRQIRDLQAS 120 NRQMMGEGVT SLPLKDLKSM EGKVERAISR IRAKKNELLF AEIELMQRRE IELHNANMFL 180 RSKIAESERA QQQMSLMPAE AEYNEPMTSQ PYDPRSFLPM NLMEPPSYTR SDQTPLQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-96 | MIKC_MADS family protein |