PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY48425.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | HB-other | ||||||||
Protein Properties | Length: 160aa MW: 19040.2 Da PI: 8.508 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.9 | 4e-19 | 40 | 95 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t +q++++e++F+++++p+a++r eL+ l+L+ q+k+WFqN+R+++k TEY48425.1 40 RKRYHRHTMHQIHAMEAFFKECPHPDAKQRNELSLALRLEPLQIKFWFQNKRTQMK 95 688899***********************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MDSKSNFSEG EEDRRINGEE VDDKSSGDDI NSTENRQNKR KRYHRHTMHQ IHAMEAFFKE 60 CPHPDAKQRN ELSLALRLEP LQIKFWFQNK RTQMKSKHER EQNRHLRAEN ERLRAENMRY 120 KEALSNASCP ACGRMAAISD VSLDERQLRM ENARLREEVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.4 | 6e-60 | HD-ZIP family protein |