PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY47217.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 676aa    MW: 74032.6 Da    PI: 5.5959
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY47217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.63.7e-1023196752374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 v++L+++Ae v++g+  laq +Larl+++ sp+g+p++R+a+y +eAL+  l+         ++ s++++ + + ++ a+k fse+sP+++f+++t+Nq
  TEY47217.1 319 VDQLFKAAELVQTGNPVLAQGILARLNHQLSPTGKPFNRAAFYCKEALQMLLHT-------NVNNSSSTPFSLVFKIGAYKSFSEISPLFQFANFTCNQ 410
                 689**************************************************9.......55666666677*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledleleeL..rv 196
                 aIlea++g +r+Hi+Dfdi++G QW++L+q+ a R +g+ps++iT+++s +s+ ++ el  t+e+L +fA+e+++ fef+++  ++l++   ++L  +v
  TEY47217.1 411 AILEALQGFDRIHIVDFDIGYGSQWASLMQEVALRGGGAPSFKITALASTSSTyDQLELGLTRENLIQFASEINIAFEFEAISIDSLNSA-SWSLpfHV 508
                 *************************************************99889***************************988888887.55553388 PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                  ++Ea+aVnl +   +l +++ s++     ++++vk+lsP++vv v++ +d+++ +F+++++++l+ ys l++sl+a    + ++  k+Er+ll+++i+
  TEY47217.1 509 PENEAIAVNLPV--CSLANHQFSVPL----IMRFVKQLSPRIVVSVDRGCDRTDLPFANHVVHTLQSYSNLLESLDAV-NVNMDALLKIERFLLQPAIE 600
                 88*******998..566655666666....9********************************************665.4577999************* PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++v+ ++++     e+ ++Wr+ + ++GF+++++s+++++qa++++++++++g++ve+++ slvl+W++++Lvs++aWr
  TEY47217.1 601 KIVMGRHRS----PEKTQHWRSLFLSSGFSSITFSNFTESQAECVIKRTPVRGFQVEKRQSSLVLCWQRKELVSATAWR 675
                 ****99998....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    
MKGMPLPFDF QGKGVFDFDF LVKNTDFIKK DCFSFGEPTS VLDSARITSS STLSSSLGGG  60
AAASTDTAGV AAVSDAKWQQ DSTTATSSNA TYSDLLPVLP SLEIGGGGNP DKVAMEDWES  120
VLSESAAVSP SQEQAFLRWV MGDVDDPAKS LQIAPAEFDF GGGFGVVDQG FGGEQFGGSS  180
FMPSLPIFPS SNRSSVEKIG LAPNPIPSNP NFKFPPNLIH SSSVPNSLGA VTLHHPAAFD  240
SSAEMRPPIF NQHQPSFFPL PFNQQQEQSL FGPPQAKRHN PRWPADEPGA LISDTGQFPH  300
YLQQQKPKME ELAQQQAVVD QLFKAAELVQ TGNPVLAQGI LARLNHQLSP TGKPFNRAAF  360
YCKEALQMLL HTNVNNSSST PFSLVFKIGA YKSFSEISPL FQFANFTCNQ AILEALQGFD  420
RIHIVDFDIG YGSQWASLMQ EVALRGGGAP SFKITALAST SSTYDQLELG LTRENLIQFA  480
SEINIAFEFE AISIDSLNSA SWSLPFHVPE NEAIAVNLPV CSLANHQFSV PLIMRFVKQL  540
SPRIVVSVDR GCDRTDLPFA NHVVHTLQSY SNLLESLDAV NVNMDALLKI ERFLLQPAIE  600
KIVMGRHRSP EKTQHWRSLF LSSGFSSITF SNFTESQAEC VIKRTPVRGF QVEKRQSSLV  660
LCWQRKELVS ATAWRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-140GRAS family protein