PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY47184.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 242aa MW: 26056.8 Da PI: 8.0151 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.3 | 7.1e-40 | 31 | 131 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll+++p ++r da+ +++yeA+ r+rdP+yG+v+++++lqqq+ +l++el++++ TEY47184.1 31 PCGACKFLRRKCVAGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLHHIPSQKRLDAVVTICYEAQSRLRDPIYGCVAHVFALQQQVVNLQQELSYIQ 129 7***********************9989********************************************************************998 PP DUF260 99 ee 100 ++ TEY47184.1 130 AH 131 76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGGLLHRVAS KSQSDIMSSE NAAGSSGGGG PCGACKFLRR KCVAGCIFAP YFDSEQGAAH 60 FAAVHKVFGA SNVSKLLHHI PSQKRLDAVV TICYEAQSRL RDPIYGCVAH VFALQQQVVN 120 LQQELSYIQA HLAALELPTP PPLQPQQLMV PASQSILDLP PIPAAYDFSA MCGDMVAPPS 180 LWSVYPRQQI DQQRQFSNAA VGGGGDLQEL ARELLNRHAP PMVVRCGNQA SSLPPNSRQM 240 RD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00220.1 | 3e-57 | LBD family protein |