PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY47139.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family HD-ZIP
Protein Properties Length: 780aa    MW: 85170 Da    PI: 5.9165
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY47139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.76.3e-21119174156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  TEY47139.1 119 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 174
                 688999***********************************************999 PP
2START200.66.6e-633065301206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+++ep+W +      e++n++e+l+  ++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t+evis
  TEY47139.1 306 ELALTAMDELVKMAQSDEPLWIRGLdggrEMLNQEEYLRGSSPCIGmkpngFVTEASRETGMVIINSLALVETLMDSN-KWAEMFPcliaRTSTTEVIS 403
                 5899*************************************99888999999**************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 sg      galqlm+a+ q+lsplvp R++ f+R+++q+ +g+w++vdvSvd  ++    + +  +++lpSg+l+++++ng+skvtwveh++++++++h
  TEY47139.1 404 SGmggtrnGALQLMKAAIQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSVDTIREAHVGAAFPSSRRLPSGCLVQDMPNGYSKVTWVEHIEYDESIVH 502
                 *****************************************************99999999999999******************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+r+lv+sg+ +ga++wvatlqrqce+
  TEY47139.1 503 QLYRPLVSSGMGFGAQRWVATLQRQCEC 530
                 **************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MNFGDFLDNN SCSGGGARIV ADIPYNSNNS MPAGAIAPPR FLAQSLSSKP MFNSPGLSLA  60
LQTGMEGQGE MARMVENNEL SNVGGRRSRD EEHESRSGSD NMDGASGDDQ DAADKPPRKK  120
RYHRHTPQQI QELESLFKEC PHPDEKQRLE LSKRLCLETR QVKFWFQNRR TQMKTQLERH  180
ENSILRQEND KLRAENMSIR EAMRNPICTN CGGPAVIGEI SLEEQHIRIE NARLKDELDR  240
VCALAGKFLG RPTPSLELGV GGNGFTPLNT VIPSDFGVGI ASPLPVATPK AAGMSVNPME  300
RSMYLELALT AMDELVKMAQ SDEPLWIRGL DGGREMLNQE EYLRGSSPCI GMKPNGFVTE  360
ASRETGMVII NSLALVETLM DSNKWAEMFP CLIARTSTTE VISSGMGGTR NGALQLMKAA  420
IQVLSPLVPV REVNFLRFCK QHAEGVWAVV DVSVDTIREA HVGAAFPSSR RLPSGCLVQD  480
MPNGYSKVTW VEHIEYDESI VHQLYRPLVS SGMGFGAQRW VATLQRQCEC LAILMSSTVP  540
ARDHSAAITA GGRRSMLKLA QRMTNNFCAG VCASSVHKWN KLRTENVDED VQVMTRKSID  600
DPGEPPGIVL SAATSVWLPV SPQRLFDFLR DERLRSEWDI LSNGGPMQEM AHIAKGQDHG  660
NCVSLLRASA VNSNQSSMLI LQETCIDSAG SLVVYAPVDI PAMHVVMNGG DSAYVALLPS  720
GFAIVPDGNG SGDGSLLTVA FQILVNSLPT AKLTVESVET VNNLISCTVQ KIKAALQCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein