PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46699.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 309aa MW: 35317.2 Da PI: 5.5999

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.4	2.9e-21	20	108	1	79
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstc 79 rW++qe+l+Lie++r eer ++g+ + +++W+ v++++r+ g+ r+p+qC+++w+nl ++kki++++++ ++e++s + TEY46699.1 20 RWSRQETLVLIEGKRLAEERGQNGRrsgsvfgsdQVEAKWDYVASHCRRNGVGRGPIQCRKRWSNLLSDFKKIRTWDSRVpQEEDESFW 108 8************9999999875566677777******************************************98444554433 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MAAQGLQSPA DSNKTPRHPR WSRQETLVLI EGKRLAEERG QNGRRSGSVF GSDQVEAKWD 60 YVASHCRRNG VGRGPIQCRK RWSNLLSDFK KIRTWDSRVP QEEDESFWDM RSDSRRERKL 120 PGFFDREVYE VLDRKDFVGS AYQLALVAVS PHENNVNGDS LDDEDGMVDS EEAEEEAEEV 180 LVTSPGKENV QANDKTYTIP SPVPISEMRY KPSYTNQGTG NKNKNFRREE EFQEGAKKRK 240 RSPSDCVKTD VDSILIKALE RNNELLSAQL EDQKSSFQLA REQNKDQHEL IVEALTKINA 300 ALEKIANKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	242	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	3e-62	Trihelix family protein