PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46659.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 354aa MW: 38921.6 Da PI: 5.3567

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	174.6	9.9e-55	38	142	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw+ q i++++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv TEY46659.1 38 QLQMFWNFQqneIQNVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 136 89**977677999******************************************************************************** PP NF-YC 97 prdelk 102 prde+k TEY46659.1 137 PRDEIK 142 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MENNPQQSAT PPYPPAVAAP GYPSQPPYQH LLQQQQQQLQ MFWNFQQNEI QNVNDFKNHQ 60 LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI RSWLHAEENK RRTLQKNDIA 120 AAITRTDIFD FLVDIVPRDE IKDEAASLGG IVGPPSGPGG VPVVPYFYPP MGQTMIGRPA 180 VVPGVDPGVY VQPPPPPPSQ AWQSVWQTGA DDGSYGSGGG ASSGQGNLDD LELLFVIFRT 240 KFCLGFLLLY CTSAVYAATC KKIYLVELVN LVASKLLVNL LPFGACVSRV PGMSRHHGSN 300 FFMQNSFFGC LSALSAYDLD IPKDKPGRNQ QAVMAIGDFP APSLESDSWF FLFA

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MENNPQQSAT PPYPPAVAAP GYPSQPPYQH LLQQQQQQLQ MFWNFQQNEI QNVNDFKNHQ  60
LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI RSWLHAEENK RRTLQKNDIA  120
AAITRTDIFD FLVDIVPRDE IKDEAASLGG IVGPPSGPGG VPVVPYFYPP MGQTMIGRPA  180
VVPGVDPGVY VQPPPPPPSQ AWQSVWQTGA DDGSYGSGGG ASSGQGNLDD LELLFVIFRT  240
KFCLGFLLLY CTSAVYAATC KKIYLVELVN LVASKLLVNL LPFGACVSRV PGMSRHHGSN  300
FFMQNSFFGC LSALSAYDLD IPKDKPGRNQ QAVMAIGDFP APSLESDSWF FLFA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	117	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	8e-68	NF-YC family protein