PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46577.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 371aa MW: 40038.1 Da PI: 6.7615

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.2	1.1e-05	24	55	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ +++ + lfC+ + ++C C + H TEY46577.1 24 KPCDFCKSAAALLFCRAHSAFMCMACDAKLHD 55 68*****9***************99994 PP
2	zf-B_box	25.1	3.6e-08	64	104	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++C+ +e+ ++ l C+ + lC++C +H+ H TEY46577.1 64 VWMCDVCEQAPAALTCKADAAALCATCDRDIHSVnplaqrH 104 689***************************99425555555 PP
3	CCT	70.2	5.2e-24	298	341	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRYkeK+k+RkFeK+irY sRKa+Ae+RpRvKGrF+k++ TEY46577.1 298 REARVLRYKEKKKNRKFEKTIRYTSRKAYAETRPRVKGRFAKRT 341 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MGVTTLDAIK GARCFPEGWN AAAKPCDFCK SAAALLFCRA HSAFMCMACD AKLHDAAPAS 60 HGKVWMCDVC EQAPAALTCK ADAAALCATC DRDIHSVNPL AQRHDRAAVV PFYATAESEL 120 MKSTTAIFDD APVADSIGNR KLDDCIADSI SNRKLDDYIA DSWIATNPIV PTKLPPPPGS 180 KSVEFLFADS DFDSYQMCSQ PSSDSLVPVQ TTAAPPLSGQ LSHQQSPVNR FEIDFTRSNI 240 TSYSNSYSAA SLSHSVSSSS MEVGFVPDGN AETSYPFTLS SISDPIANHV TPAAGMDREA 300 RVLRYKEKKK NRKFEKTIRY TSRKAYAETR PRVKGRFAKR TDSEAEIDGI LSFVSGNHIA 360 GAGYGIVPTS F

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MGVTTLDAIK GARCFPEGWN AAAKPCDFCK SAAALLFCRA HSAFMCMACD AKLHDAAPAS  60
HGKVWMCDVC EQAPAALTCK ADAAALCATC DRDIHSVNPL AQRHDRAAVV PFYATAESEL  120
MKSTTAIFDD APVADSIGNR KLDDCIADSI SNRKLDDYIA DSWIATNPIV PTKLPPPPGS  180
KSVEFLFADS DFDSYQMCSQ PSSDSLVPVQ TTAAPPLSGQ LSHQQSPVNR FEIDFTRSNI  240
TSYSNSYSAA SLSHSVSSSS MEVGFVPDGN AETSYPFTLS SISDPIANHV TPAAGMDREA  300
RVLRYKEKKK NRKFEKTIRY TSRKAYAETR PRVKGRFAKR TDSEAEIDGI LSFVSGNHIA  360
GAGYGIVPTS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	3e-56	CO-like family protein