PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46540.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 348aa MW: 39199.7 Da PI: 9.2392

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30.9	6.6e-10	47	103	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ + Aa+ ++ a++k++g TEY46540.1 47 SIYRGVTRHRWTGRYEAHLWDkNCWNEaQNKKGRQGAYDDEGAAARSYDLAALKYWG 103 57*****************99999999988888*669**********98 PP
2	AP2	52.3	1.4e-16	146	197	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g TEY46540.1 146 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAIAYDMAAIEYRG 197 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAKLSPHKNS NINSNNTTNL NVVNGVAMKP KRTRKTIPRD SPPKRSSIYR GVTRHRWTGR 60 YEAHLWDKNC WNEAQNKKGR QGAYDDEGAA ARSYDLAALK YWGRDTILNF PVSTYEKEIV 120 EMARQSREEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT 180 QEEAAIAYDM AAIEYRGLNA VTNFDLSRYI KWLKPNATAD AAAASASAST STSTNPNNTG 240 SCHDSASLPP LHQARPLISE ARPATATSAL GLLLQSSKFK ELMAAEYPSS TQFQPPPVVE 300 DHEQHQALFD ESNDYCTYNE DIYVDFSSMM HHPIPPPFHS LQHLEEDL

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAKLSPHKNS NINSNNTTNL NVVNGVAMKP KRTRKTIPRD SPPKRSSIYR GVTRHRWTGR  60
YEAHLWDKNC WNEAQNKKGR QGAYDDEGAA ARSYDLAALK YWGRDTILNF PVSTYEKEIV  120
EMARQSREEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT  180
QEEAAIAYDM AAIEYRGLNA VTNFDLSRYI KWLKPNATAD AAAASASAST STSTNPNNTG  240
SCHDSASLPP LHQARPLISE ARPATATSAL GLLLQSSKFK ELMAAEYPSS TQFQPPPVVE  300
DHEQHQALFD ESNDYCTYNE DIYVDFSSMM HHPIPPPFHS LQHLEEDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	5e-98	AP2 family protein