PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY46480.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 415aa MW: 45533.2 Da PI: 9.6134

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY46480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.8e-06	38	60	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H TEY46480.1 38 YVCEICNQGFQRDQNLQMHRRRH 60 9*********************9 PP
2	zf-C2H2	16.1	3.2e-05	115	137	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k H++t+ TEY46480.1 115 WVCDKCNKGYAVQSDYKAHLKTC 137 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MLNSPTTSRR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC EICNQGFQRD QNLQMHRRRH 60 KVPWKLLKRE TPVARKRVFV CPESSCLHHD PCHALGDLVG IKKHFRRKHS NQKQWVCDKC 120 NKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DACSMGRLRS DCHPLHAAAA 180 AATATAACLS RTASSPSSDT NLSAGPWAGG YSNVAAPTDS IFMANAGPTR HRSRPPNLEL 240 QLLTKASSSS LGFSGNSTNL DSTQLQLSIG SSEIGDKAEN VAAAGSRYSP MWSSSTSVAA 300 ATVREEAEEQ LRAAMAERAY AEEARQPAKR QRELAEQEFA NAKRIRQQAA AELEKAQALK 360 EQAAQQLSAT ILQITCHSCK HRFHPGAAET SASAANSIRR GYISAALREW EVKKN

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MLNSPTTSRR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC EICNQGFQRD QNLQMHRRRH  60
KVPWKLLKRE TPVARKRVFV CPESSCLHHD PCHALGDLVG IKKHFRRKHS NQKQWVCDKC  120
NKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DACSMGRLRS DCHPLHAAAA  180
AATATAACLS RTASSPSSDT NLSAGPWAGG YSNVAAPTDS IFMANAGPTR HRSRPPNLEL  240
QLLTKASSSS LGFSGNSTNL DSTQLQLSIG SSEIGDKAEN VAAAGSRYSP MWSSSTSVAA  300
ATVREEAEEQ LRAAMAERAY AEEARQPAKR QRELAEQEFA NAKRIRQQAA AELEKAQALK  360
EQAAQQLSAT ILQITCHSCK HRFHPGAAET SASAANSIRR GYISAALREW EVKKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-118	C2H2 family protein