PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY45362.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 492aa MW: 54297.6 Da PI: 7.7418

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY45362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.1	1.6e-11	150	202	8	55
AP2 8 wdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 +++++gr++A+++d ++ g ++ ++++lg ++ +++Aa+a++ a++k++g TEY45362.1 150 QHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEDKAARAYDLAALKYWG 202 799*********988886678446******99***********98 PP
2	AP2	47	6.4e-15	245	296	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY45362.1 245 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 296 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MPLKSDGSLC LMEALSQSQP PPPKLEDFLG AAAAHQEMDF YTHQNHYFSN YNFYQHQIPQ 60 IPEEEIAPCL KTWMDHNHHN LTEAAAAPQS LSLSMSPGSQ SSCITASLQL SETNESAAME 120 TKKRGAQKLG QQKQTVHRKS IDTFGQRTSQ HRWTGRYEAH LWDNSCKKEG QTRKGRQVYL 180 GGYDMEDKAA RAYDLAALKY WGPSTHINFG LENYHQELED MKNMSRQEYV AHLRRKSSGF 240 SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV 300 TNFDISRYDV EKIMTSNTLP TGEVARRTKE VRSTSEVASI EECHAVEACG SAQVGHISNG 360 CDWKMVLHSD APVVQAPPGH QGSVGVGTLD VKTLNLGSYQ SPTFSVGLHD LMGGLNSSQR 420 VSNATMAPHF SNASSLVTSL SSSREASPDR YGAPNKFVSP PANVGAWIPT AQIRPVSLTT 480 AHMPVFAAWN DA

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MPLKSDGSLC LMEALSQSQP PPPKLEDFLG AAAAHQEMDF YTHQNHYFSN YNFYQHQIPQ  60
IPEEEIAPCL KTWMDHNHHN LTEAAAAPQS LSLSMSPGSQ SSCITASLQL SETNESAAME  120
TKKRGAQKLG QQKQTVHRKS IDTFGQRTSQ HRWTGRYEAH LWDNSCKKEG QTRKGRQVYL  180
GGYDMEDKAA RAYDLAALKY WGPSTHINFG LENYHQELED MKNMSRQEYV AHLRRKSSGF  240
SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV  300
TNFDISRYDV EKIMTSNTLP TGEVARRTKE VRSTSEVASI EECHAVEACG SAQVGHISNG  360
CDWKMVLHSD APVVQAPPGH QGSVGVGTLD VKTLNLGSYQ SPTFSVGLHD LMGGLNSSQR  420
VSNATMAPHF SNASSLVTSL SSSREASPDR YGAPNKFVSP PANVGAWIPT AQIRPVSLTT  480
AHMPVFAAWN DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-129	AP2 family protein