PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY45302.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 399aa MW: 45881.1 Da PI: 7.1561

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY45302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.6e-05	147	170	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++++Lk+H r H TEY45302.1 147 YICSVCGRKCKTNMDLKKHFRQlH 170 89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MSIPINSLKP QLQSLVFPTR AITHKPITLK PPIPLRAKPY QWRPVKSCFS SQEIDMVKTK 60 DGFYAAKAKT VVILWDLDNK PPRRPPYEAA QALKSMAKKF GDVIDMAAYA NRHAFIHLPQ 120 WVVQGRREER RLDALERKWL STPPEPYICS VCGRKCKTNM DLKKHFRQLH ERERQKKMNR 180 MRSLKGKKRR NFKERFIDGN EKYNEAARRL VTPKVGYGLA QELRRAGVYV KTVQDKPQAA 240 DLALKRQMMH SMSRGVDWIV LVSDDSDFSE MLRKAREANL GTVVVGDQDM ALGRHADVWV 300 QWNRVENGEI QESDLELRKR ECDDDDERGE RFSVSEFDGN LASVELGLDE IIGAMGLNGV 360 RVSSFSEGEE EDDDDCDDEG DYLLDSDDEG FQEENGVYL

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MSIPINSLKP QLQSLVFPTR AITHKPITLK PPIPLRAKPY QWRPVKSCFS SQEIDMVKTK  60
DGFYAAKAKT VVILWDLDNK PPRRPPYEAA QALKSMAKKF GDVIDMAAYA NRHAFIHLPQ  120
WVVQGRREER RLDALERKWL STPPEPYICS VCGRKCKTNM DLKKHFRQLH ERERQKKMNR  180
MRSLKGKKRR NFKERFIDGN EKYNEAARRL VTPKVGYGLA QELRRAGVYV KTVQDKPQAA  240
DLALKRQMMH SMSRGVDWIV LVSDDSDFSE MLRKAREANL GTVVVGDQDM ALGRHADVWV  300
QWNRVENGEI QESDLELRKR ECDDDDERGE RFSVSEFDGN LASVELGLDE IIGAMGLNGV  360
RVSSFSEGEE EDDDDCDDEG DYLLDSDDEG FQEENGVYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	190	LKGKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-141	C2H2 family protein