PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY45249.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 1067aa MW: 117480 Da PI: 4.7035

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY45249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00049	302	323	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++C+ +F++k+++ +H+++ H TEY45249.1 302 CHKCSITFNNKEEFLNHQSSvH 323 ******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1067 aa Download sequence
MNPADLFPVK IEYLNSLPVQ QFSSPPPTGI KRKRDRPRRI ENLGNAADLA VEVSITDASY 60 ADTLQLAMPS LNEFFPRDNS DDKDREELNS DGVAVDLAAL GASVHPYWEE IRSRTNGLRS 120 EEELLGFLTG LDGRWGSRRK KRRIVDANEF GSKLPVGWTL LLSIKKKNGN VWLYCRRYIR 180 NFYLLYYEIH VMAIAESEVC SGTTSLPSGL HFVSCKGVSL YLLSLHGMQD TNSCSYGQYN 240 DVVNDADKLT TVPLTAQDDY EVENFSQASP PHLDLVTGNH EIQVAVNVGN ASEDRIGESI 300 CCHKCSITFN NKEEFLNHQS SVHRKNRSKN IVRITDGVII KDGKFECQFC HKTFSERHRY 360 NGHVGAHVRF QAKIPGEFSQ SVYPTSTNEF STQDNAMEGA SNSHNAADVC NSVTTYGPKI 420 CASPDKVDGH FGDLEDASRN ITGNGGMDKA TNIVTETSDC SVPEVLFSSN ENKNLHEDAC 480 LNDSTAKISL DGSAMQGGKM MESTLCQNGA ADSVRNSSVI ENSVSIDKPG KTIASNICLL 540 DSNDHVKECP LVNDSNRKTV EFSFNSQKLT VNESIFNLFG AKHQGEQEKD LAVSITEKSD 600 SQYLLCKDIG TTESITSGSE ASKIEKGPNI RMPIADEKKP CQEDNVPCSI VNCKVGYTLS 660 FSECENDSSK AYNEGTNRLG EMQYGMASVI QSWNEQENVT KKDDAEVFTH LLEVPGMGDM 720 SNSHLVADDK NTYHDENNDS GGCGRERKVP ELDCLRNFGN DQSSDLFSSG SAIISSNSIT 780 GTTDKQLSAE DNMIAVFSDT IEERIQDPSE GILLNQSGIS EVSIEAFTLN KIYTTPANHS 840 ELNGIENAGK HELSLSFGSL QTDMFAEANR VEQESYQANS FNIESVRPKT YRDSSQPSIL 900 NSDITADLGY SNQSFNDTTN ESGSSFNVAH PEKDWDGTRG NEVRTSSQNF MVGFRNSSFP 960 TSEYAAADGP WRTGHDNVFG GCYDANSGTF DLAPNKGQGS SYGVDHNYGM MRPGRAQPVE 1020 YSFINEQLVN SSLPEEANFP YRTNMEQDIG SLVLARKGRL NAKCIPC

Sequence ? help Back to Top

Protein Sequence Length: 1067 aa Download sequence

MNPADLFPVK IEYLNSLPVQ QFSSPPPTGI KRKRDRPRRI ENLGNAADLA VEVSITDASY  60
ADTLQLAMPS LNEFFPRDNS DDKDREELNS DGVAVDLAAL GASVHPYWEE IRSRTNGLRS  120
EEELLGFLTG LDGRWGSRRK KRRIVDANEF GSKLPVGWTL LLSIKKKNGN VWLYCRRYIR  180
NFYLLYYEIH VMAIAESEVC SGTTSLPSGL HFVSCKGVSL YLLSLHGMQD TNSCSYGQYN  240
DVVNDADKLT TVPLTAQDDY EVENFSQASP PHLDLVTGNH EIQVAVNVGN ASEDRIGESI  300
CCHKCSITFN NKEEFLNHQS SVHRKNRSKN IVRITDGVII KDGKFECQFC HKTFSERHRY  360
NGHVGAHVRF QAKIPGEFSQ SVYPTSTNEF STQDNAMEGA SNSHNAADVC NSVTTYGPKI  420
CASPDKVDGH FGDLEDASRN ITGNGGMDKA TNIVTETSDC SVPEVLFSSN ENKNLHEDAC  480
LNDSTAKISL DGSAMQGGKM MESTLCQNGA ADSVRNSSVI ENSVSIDKPG KTIASNICLL  540
DSNDHVKECP LVNDSNRKTV EFSFNSQKLT VNESIFNLFG AKHQGEQEKD LAVSITEKSD  600
SQYLLCKDIG TTESITSGSE ASKIEKGPNI RMPIADEKKP CQEDNVPCSI VNCKVGYTLS  660
FSECENDSSK AYNEGTNRLG EMQYGMASVI QSWNEQENVT KKDDAEVFTH LLEVPGMGDM  720
SNSHLVADDK NTYHDENNDS GGCGRERKVP ELDCLRNFGN DQSSDLFSSG SAIISSNSIT  780
GTTDKQLSAE DNMIAVFSDT IEERIQDPSE GILLNQSGIS EVSIEAFTLN KIYTTPANHS  840
ELNGIENAGK HELSLSFGSL QTDMFAEANR VEQESYQANS FNIESVRPKT YRDSSQPSIL  900
NSDITADLGY SNQSFNDTTN ESGSSFNVAH PEKDWDGTRG NEVRTSSQNF MVGFRNSSFP  960
TSEYAAADGP WRTGHDNVFG GCYDANSGTF DLAPNKGQGS SYGVDHNYGM MRPGRAQPVE  1020
YSFINEQLVN SSLPEEANFP YRTNMEQDIG SLVLARKGRL NAKCIPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	167	RRKKRRIVDANEFGSKLPVGWTLLLSIKKK
2	139	168	RRKKRRIVDANEFGSKLPVGWTLLLSIKKK
3	140	169	RRKKRRIVDANEFGSKLPVGWTLLLSIKKK