PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY45062.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 512aa MW: 57236.4 Da PI: 9.2579

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY45062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	65.4	1.2e-20	419	499	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W +e+++Li++r e++ r++ +k +++lWee+s+++ + g++rsp qCk+ w +l ++y++ k+ ++++ s++pyf++++ TEY45062.1 419 KWRPEEIKKLIKVRGELHIRFQVQKGRMALWEEISSNLLAVGVSRSPGQCKSLWTSLVQKYEESKTDKQNQ-----SSWPYFQDID 499 7**************************************************************999973.....57***998 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MRTSIMRRMA ELEGRRIDAG IDGSGGGGYS YGSGGKAVSV TVIPGNETRV MKMMNRLAEI 60 GPQIVMGKNE LLHTSGHAHR EELDEVLKIV KPQHFLPIHG ELLFLKEHEL LGRSTGVRHT 120 TVIKNGEMLG VSHLRNRRVL SNGFIALGKE NLQLMYSDGD KAFGTATELC IDERMRIASD 180 GIIVVSMEIM RPDGSAEKTL KGKIRITTRC LWLDKGKLLD ALHKAAHAAL SSCPVSCPLA 240 HMERIVSEVL RKMVRKYSSK RPEVIAIAIE NPVGVVADEI NEKLSGKSHI NPEFLASRKA 300 IDRHEKRKQP IARREEDFND FAFEKSTSVQ ELEDQDFDEV RGEIATSNSR LPDRAPKTDD 360 SDNFWKPFVS SSAPVQAEPN GELLPAAEVK EKGKDERSEV DPGLPDQRAK SSKTVKRNKW 420 RPEEIKKLIK VRGELHIRFQ VQKGRMALWE EISSNLLAVG VSRSPGQCKS LWTSLVQKYE 480 ESKTDKQNQS SWPYFQDIDN ILSSLETSGS SK

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MRTSIMRRMA ELEGRRIDAG IDGSGGGGYS YGSGGKAVSV TVIPGNETRV MKMMNRLAEI  60
GPQIVMGKNE LLHTSGHAHR EELDEVLKIV KPQHFLPIHG ELLFLKEHEL LGRSTGVRHT  120
TVIKNGEMLG VSHLRNRRVL SNGFIALGKE NLQLMYSDGD KAFGTATELC IDERMRIASD  180
GIIVVSMEIM RPDGSAEKTL KGKIRITTRC LWLDKGKLLD ALHKAAHAAL SSCPVSCPLA  240
HMERIVSEVL RKMVRKYSSK RPEVIAIAIE NPVGVVADEI NEKLSGKSHI NPEFLASRKA  300
IDRHEKRKQP IARREEDFND FAFEKSTSVQ ELEDQDFDEV RGEIATSNSR LPDRAPKTDD  360
SDNFWKPFVS SSAPVQAEPN GELLPAAEVK EKGKDERSEV DPGLPDQRAK SSKTVKRNKW  420
RPEEIKKLIK VRGELHIRFQ VQKGRMALWE EISSNLLAVG VSRSPGQCKS LWTSLVQKYE  480
ESKTDKQNQS SWPYFQDIDN ILSSLETSGS SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein