PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY44307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 157aa MW: 16922.7 Da PI: 7.2633 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 92.9 | 3.8e-29 | 2 | 105 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C++lrr+C+++C+l+p++ p++q++++ ++ k+FG+s +l +++++p ++r+++++sl+y A+ r+ +Pv+Gavg++++++++++q+++e+ TEY44307.1 2 SCSGCRILRRGCSDHCILRPCLdwiqsPDAQAHATLFLSKFFGRSCLLTFIASIPVSKRSALFQSLLYDACGRTVNPVNGAVGLLSTGNWHICQAAVET 100 6*************************99**********************************************************************9 PP DUF260 95 allke 99 +l+++ TEY44307.1 101 VLAGK 105 98765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
MSCSGCRILR RGCSDHCILR PCLDWIQSPD AQAHATLFLS KFFGRSCLLT FIASIPVSKR 60 SALFQSLLYD ACGRTVNPVN GAVGLLSTGN WHICQAAVET VLAGKVLLPI SLGSPHGPMQ 120 DCFSQLGWVP NCIETMPESG VDQVGAEEMP KLLNLFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G67420.1 | 2e-57 | LBD family protein |