PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44134.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 614aa MW: 67467 Da PI: 6.1195

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.5	1.1e-10	224	280	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g TEY44134.1 224 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 280 57*****************5444.2455535555.7799999***********98 PP
2	AP2	47.7	3.9e-15	323	374	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TEY44134.1 323 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 374 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MSSMNNWLGF SLSPQELQDQ QHPNHQSLGF NSDEISNTQI SNESCFDSAI PSLNLPAPHF 60 GILEAFNGNP HSQGLYLQMG CINFFHFADW NMNDMNMNTF SSSSQNLEDE NRPKLENFLG 120 VNHQEHKYQL SMYQDSEASA SNNGLPMITN WLTNSPAPPH AAESSEAAAP AAAAQTLSLS 180 MSTGSQSSSP LPSDNKLGNA AAEGGAAIES VPRRSIDTFG QRTSIYRGVT RHRWTGRYEA 240 HLWDNSCRRE GQSRKGRQGG YDKEDKAARA YDLAALKYWG TTTTTNFPIS NYEKEIEDMK 300 NMTRQEFVAS IRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTEEE 360 AAEAYDIAAI KFRGLNAVTN FEINRYDVKS ILESSTLPIR GAAKRLKDAE NAEMALDLHR 420 ASEANLSLHL TEGQMSGFGS SSSNAHGWPT VAFQQAQPLS MYPYGHQMLW CKQEHDPYVG 480 HAYNEISHQL QLGINAQNFL QPSALHNIMG LDSSNIEHSS GSNSAVYGNS GGGDGSVVPT 540 MGAMVVQDGN QSLDYESMFG SADAYQQARN LYYQSQQSSS NWIPTAVPTG SAGARANNAP 600 ENQGASTFTV WNDT

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MSSMNNWLGF SLSPQELQDQ QHPNHQSLGF NSDEISNTQI SNESCFDSAI PSLNLPAPHF  60
GILEAFNGNP HSQGLYLQMG CINFFHFADW NMNDMNMNTF SSSSQNLEDE NRPKLENFLG  120
VNHQEHKYQL SMYQDSEASA SNNGLPMITN WLTNSPAPPH AAESSEAAAP AAAAQTLSLS  180
MSTGSQSSSP LPSDNKLGNA AAEGGAAIES VPRRSIDTFG QRTSIYRGVT RHRWTGRYEA  240
HLWDNSCRRE GQSRKGRQGG YDKEDKAARA YDLAALKYWG TTTTTNFPIS NYEKEIEDMK  300
NMTRQEFVAS IRRKSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFSTEEE  360
AAEAYDIAAI KFRGLNAVTN FEINRYDVKS ILESSTLPIR GAAKRLKDAE NAEMALDLHR  420
ASEANLSLHL TEGQMSGFGS SSSNAHGWPT VAFQQAQPLS MYPYGHQMLW CKQEHDPYVG  480
HAYNEISHQL QLGINAQNFL QPSALHNIMG LDSSNIEHSS GSNSAVYGNS GGGDGSVVPT  540
MGAMVVQDGN QSLDYESMFG SADAYQQARN LYYQSQQSSS NWIPTAVPTG SAGARANNAP  600
ENQGASTFTV WNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-134	AP2 family protein