PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY43876.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 675aa MW: 74552.5 Da PI: 7.0435

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY43876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.1	3.8e-24	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF+ + +++ l TEY43876.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLLAGDSIVFM--RAENGDL 215 89**************************996555555..89*******************************************..4488889 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ TEY43876.1 216 CIGIRRA 222 **996 PP
2	Auxin_resp	111.2	1e-36	276	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++ +FevvY+Prast+eF+vk++ v+ a+++++++GmRfkmafetedss++++ +Gt+++v+ +dp+ Wp+S+Wr+L+ TEY43876.1 276 AASLAASGRPFEVVYYPRASTPEFCVKASLVKVAMQIRWCLGMRFKMAFETEDSSRISWfMGTISSVQVVDPIWWPDSPWRLLQ 359 678999****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MISFMESKEK MRETERCLDS QLWHACAGSM VQMPLKNSKV FYFPQGHSEH SCGNVDFRKF 60 LRIPAYIPCR VSSISFMADP DTDEVFTKMR LSPASGSDAA EVDHDEGGAV GSENQEMPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT 180 PRRHLLTTGW STFVNHKKLL AGDSIVFMRA ENGDLCIGIR RAKRGIGDGT DTWNLAGGSS 240 IVPYGGFSSS LRDDEKNNNV NWIERGRVKA EDVVEAASLA ASGRPFEVVY YPRASTPEFC 300 VKASLVKVAM QIRWCLGMRF KMAFETEDSS RISWFMGTIS SVQVVDPIWW PDSPWRLLQV 360 AWDEPDLLQN VKRVSPWLIE LVSNMPAIHL SPFLPPRKKM RLPQHSDHPF DGQIPMPPIS 420 HHVGSSNPFG CLPNTTPAGM QGARHAKYGL SLSSLHVNKQ LQLGLFPVGF LPHDRYPTGQ 480 SRPLLPIPAS NENISCQLTM GNPTHGSAKP DHGKAAPFLL FGKPILTENQ ISLSCSSDTV 540 SPTRTGNSSS DGNVEKTGNT SDGSGCGLNQ NEVPEHSSCE GIQPDILETG HCKVFMESED 600 VGRTLDLSLL GSYEQLYRKL ADMFGIDVSE ILNRVLRRDA AGRVKPVGDQ PFSNFIKTTR 660 RLTILADSSG YNVEV

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MISFMESKEK MRETERCLDS QLWHACAGSM VQMPLKNSKV FYFPQGHSEH SCGNVDFRKF  60
LRIPAYIPCR VSSISFMADP DTDEVFTKMR LSPASGSDAA EVDHDEGGAV GSENQEMPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKLL AGDSIVFMRA ENGDLCIGIR RAKRGIGDGT DTWNLAGGSS  240
IVPYGGFSSS LRDDEKNNNV NWIERGRVKA EDVVEAASLA ASGRPFEVVY YPRASTPEFC  300
VKASLVKVAM QIRWCLGMRF KMAFETEDSS RISWFMGTIS SVQVVDPIWW PDSPWRLLQV  360
AWDEPDLLQN VKRVSPWLIE LVSNMPAIHL SPFLPPRKKM RLPQHSDHPF DGQIPMPPIS  420
HHVGSSNPFG CLPNTTPAGM QGARHAKYGL SLSSLHVNKQ LQLGLFPVGF LPHDRYPTGQ  480
SRPLLPIPAS NENISCQLTM GNPTHGSAKP DHGKAAPFLL FGKPILTENQ ISLSCSSDTV  540
SPTRTGNSSS DGNVEKTGNT SDGSGCGLNQ NEVPEHSSCE GIQPDILETG HCKVFMESED  600
VGRTLDLSLL GSYEQLYRKL ADMFGIDVSE ILNRVLRRDA AGRVKPVGDQ PFSNFIKTTR  660
RLTILADSSG YNVEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein