PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY42184.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Protein Properties

Length: 761aa MW: 84608.8 Da PI: 6.9644

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY42184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.2	9.5e-16	32	121	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 fk++ ++ s+ l+lp a+ +++ ++++ ++ed sg++W+vk++ ++s +++GW++F ++gLk+g++++F++++ f +vk+f + TEY42184.1 32 FKIM--FGNNCSHFLYLPPGSAKLMKHL--TNQETQIEDVSGQRWSVKMSLVNGS--LAFERGWEKFFVDHGLKVGEVMTFQYIEGGHF--TVKIFGT 121 5555..445667889****9766555..556899*********666665..889********************9975666..9999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MVSRGLACVD CLLKCDRSHA ALGGFLPVYR FFKIMFGNNC SHFLYLPPGS AKLMKHLTNQ 60 ETQIEDVSGQ RWSVKMSLVN GSLAFERGWE KFFVDHGLKV GEVMTFQYIE GGHFTVKIFG 120 TSGRERTNFD RRSKKRRRDH GIASEDESFL ASRDESRNCK MKIEVENAGL GVSTLVPIPE 180 DIVDPICMIN KNDWYHAEHR ISLCDLSFEM ENRTSEANKC EGGVITMLDP LAETEEHGAY 240 LDNAPSPKVS ISCDRILELT NTVEGDEVEK TKTTAEEVVV IKRDIADESR KKMDDTQMAP 300 QSHQEVSHSG HALTNKFHEK LSDNSEMKKG ILDNVCSFQD VIPVAVDELE SISVYPSVGS 360 SKIVKREVKS SSSTVKDPLG LHAAKKEVNM EDQAKRIHQG SCGASFREHI YVKLIRIGGG 420 GERKMVGPAE RKEEAGSCVA GNSSKYSSKD PFSTVSVAKN QPKIPPRTSN NSAAILPIVT 480 APLLSSSLST TALPEIPPIT TSTIHPDIDT KADNRTPLPL VVQQPIHISV LVPLPSPTNL 540 PTPTVVTTPL WFSSADISLF QHFFPLLLCT VHAAAAELAT IMYLLLLVHG HIPWFSFSPP 600 VQKHEWEPPP NNVIGEEPSA MWNQPQMIIP PIVKVEPDLP YETGQLDTTN PISICPFSTQ 660 IESQPYLEVS VKIVLAHTRR WRLRLTKSQK MKAPMIIYLR GSVGGLWPVV YREYVGGGAL 720 TANWTEFCKR NSIKPRDNCR FQAEENISFV VFRVIVTHGS D

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MVSRGLACVD CLLKCDRSHA ALGGFLPVYR FFKIMFGNNC SHFLYLPPGS AKLMKHLTNQ  60
ETQIEDVSGQ RWSVKMSLVN GSLAFERGWE KFFVDHGLKV GEVMTFQYIE GGHFTVKIFG  120
TSGRERTNFD RRSKKRRRDH GIASEDESFL ASRDESRNCK MKIEVENAGL GVSTLVPIPE  180
DIVDPICMIN KNDWYHAEHR ISLCDLSFEM ENRTSEANKC EGGVITMLDP LAETEEHGAY  240
LDNAPSPKVS ISCDRILELT NTVEGDEVEK TKTTAEEVVV IKRDIADESR KKMDDTQMAP  300
QSHQEVSHSG HALTNKFHEK LSDNSEMKKG ILDNVCSFQD VIPVAVDELE SISVYPSVGS  360
SKIVKREVKS SSSTVKDPLG LHAAKKEVNM EDQAKRIHQG SCGASFREHI YVKLIRIGGG  420
GERKMVGPAE RKEEAGSCVA GNSSKYSSKD PFSTVSVAKN QPKIPPRTSN NSAAILPIVT  480
APLLSSSLST TALPEIPPIT TSTIHPDIDT KADNRTPLPL VVQQPIHISV LVPLPSPTNL  540
PTPTVVTTPL WFSSADISLF QHFFPLLLCT VHAAAAELAT IMYLLLLVHG HIPWFSFSPP  600
VQKHEWEPPP NNVIGEEPSA MWNQPQMIIP PIVKVEPDLP YETGQLDTTN PISICPFSTQ  660
IESQPYLEVS VKIVLAHTRR WRLRLTKSQK MKAPMIIYLR GSVGGLWPVV YREYVGGGAL  720
TANWTEFCKR NSIKPRDNCR FQAEENISFV VFRVIVTHGS D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	139	RRSKKRRRD
2	134	162	KKRRRDHGIASEDESFLASRDESRNCKMK
3	135	163	KKRRRDHGIASEDESFLASRDESRNCKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	5e-10	B3 family protein