PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY41530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 27940.7 Da PI: 10.1822 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84 | 9.2e-27 | 39 | 89 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr+g++KKA ELS+LCdae+a+i+fs +gkl++yss TEY41530.1 39 KKIDNLTARQVTFSKRRKGLFKKARELSTLCDAEIALIVFSASGKLFDYSS 89 68***********************************************96 PP | |||||||
2 | K-box | 41.2 | 7e-15 | 122 | 186 | 22 | 86 |
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkeke 86 kL + + +L e+++l Ge L+ Lsl L++Le+ +e ++++iR++Kne l ++++el+ k + TEY41530.1 122 GKLSSHLMELSIELKQLEGEHLQGLSLASLMKLEKLIEGGMSRIRKTKNERLEDEMRELKTKASA 186 58999999*****************************************************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MRSNFTLFLQ ISCTTLPPLN VKFSFFKLFK MVRQKIEIKK IDNLTARQVT FSKRRKGLFK 60 KARELSTLCD AEIALIVFSA SGKLFDYSSS SMMQIIQRHD HQTECKLLRQ PPLYIQGSDG 120 HGKLSSHLME LSIELKQLEG EHLQGLSLAS LMKLEKLIEG GMSRIRKTKN ERLEDEMREL 180 KTKASASTYP NFLPNKYEFK LMEENSLLNT QPIEKSIKRN AFDLGIQLIS DSNCSGTFLK 240 LGLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-49 | MIKC_MADS family protein |