PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41075.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 413aa MW: 45814.4 Da PI: 9.1521

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	30	50	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H TEY41075.1 30 CEICNKGFQRDQNLQLHRRGH 50 *******************88 PP
2	zf-C2H2	11.6	0.00089	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + TEY41075.1 104 WKCDKCSKKYAVQSDWKAHSKIC 126 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MKLCGLSADP DAEVIALSPK SLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRT 60 NKEVKKKVYI CPEKTCVHHE ASRALGDLTG IKKHFSRKHG EKKWKCDKCS KKYAVQSDWK 120 AHSKICGTRE YKCDCGTLFS RKDSFITHRA FCDALAEESA RFSSPVASAN LSFRNELLHS 180 SGNPQFSAGM FRAELGGGGV EGGNQLSFDN NMQKPRLPLW LDSATPHPNS NNFLAATSLP 240 ELVQMNHQWQ VQGDHNQVGF GNSMASSSSA IPIPRVLKEE EQNKGNLSQA INSLYYNQNQ 300 NQNETNNAAH MSMSATALLQ KAAQMGSTRA TESSFSPSAF GLINNASFSA ANFNDQNPTN 360 LGKPENNLNG MMASESSLTR DFLGVGGNDQ IQNRQFMPEN ELAKFAMSHY SRN

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MKLCGLSADP DAEVIALSPK SLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRT  60
NKEVKKKVYI CPEKTCVHHE ASRALGDLTG IKKHFSRKHG EKKWKCDKCS KKYAVQSDWK  120
AHSKICGTRE YKCDCGTLFS RKDSFITHRA FCDALAEESA RFSSPVASAN LSFRNELLHS  180
SGNPQFSAGM FRAELGGGGV EGGNQLSFDN NMQKPRLPLW LDSATPHPNS NNFLAATSLP  240
ELVQMNHQWQ VQGDHNQVGF GNSMASSSSA IPIPRVLKEE EQNKGNLSQA INSLYYNQNQ  300
NQNETNNAAH MSMSATALLQ KAAQMGSTRA TESSFSPSAF GLINNASFSA ANFNDQNPTN  360
LGKPENNLNG MMASESSLTR DFLGVGGNDQ IQNRQFMPEN ELAKFAMSHY SRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	8e-95	C2H2 family protein