PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY39119.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 405aa MW: 44376.3 Da PI: 9.8072

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY39119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.3e-05	50	72	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H TEY39119.1 50 FICEICNKGFQRDQNLQLHRRGH 72 89*******************88 PP
2	zf-C2H2	13.1	0.00029	127	149	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ TEY39119.1 127 WKCEKCSKKYAVQSDWKAHSKTC 149 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MMSADVFSPQ INPNSKPPSA KKRRNLPGTP DPDAEVIALS PKTLMATNRF ICEICNKGFQ 60 RDQNLQLHRR GHNLPWKLKQ RANKDQIKKK VYICPEKSCV HHDPGRALGD LTGIKKHFSR 120 KHGEKKWKCE KCSKKYAVQS DWKAHSKTCG TREYKCDCGT LFSRKDSFIT HRAFCDALAE 180 ESARVVVTPS NLNDLCGNLM NNFGNPNQQK PRLSLWLDQA SSDNNSNMFI PSSNDIVQMA 240 SNNLFTSNPS MVNYANLSLS PLQGMMKEET ATATTMPDSL ASIYSNSHNS ATALLQKAAQ 300 MGSTKSSPAF FAAQMGSTKS SPAFFGNAVG LMTATSSSSE LHRVFENPAA NNIMNFSNSL 360 GGAANLHGFT RDFLGMGGDG AGPFLPQELA KFASITPATH FTTNH

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MMSADVFSPQ INPNSKPPSA KKRRNLPGTP DPDAEVIALS PKTLMATNRF ICEICNKGFQ  60
RDQNLQLHRR GHNLPWKLKQ RANKDQIKKK VYICPEKSCV HHDPGRALGD LTGIKKHFSR  120
KHGEKKWKCE KCSKKYAVQS DWKAHSKTCG TREYKCDCGT LFSRKDSFIT HRAFCDALAE  180
ESARVVVTPS NLNDLCGNLM NNFGNPNQQK PRLSLWLDQA SSDNNSNMFI PSSNDIVQMA  240
SNNLFTSNPS MVNYANLSLS PLQGMMKEET ATATTMPDSL ASIYSNSHNS ATALLQKAAQ  300
MGSTKSSPAF FAAQMGSTKS SPAFFGNAVG LMTATSSSSE LHRVFENPAA NNIMNFSNSL  360
GGAANLHGFT RDFLGMGGDG AGPFLPQELA KFASITPATH FTTNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-113	C2H2 family protein